Sequence 1: | NP_647793.1 | Gene: | Larp4B / 38399 | FlyBaseID: | FBgn0035424 | Length: | 1531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021325871.1 | Gene: | larp4b / 563742 | ZFINID: | ZDB-GENE-061027-39 | Length: | 1862 | Species: | Danio rerio |
Alignment Length: | 715 | Identity: | 208/715 - (29%) |
---|---|---|---|
Similarity: | 300/715 - (41%) | Gaps: | 156/715 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 206 TDALNNTNLVALDPQPHQIVVPVQVPVQV-PVPVQLPAN----GSADPQQGSHNAAGGEEPNIPL 265
Fly 266 DKLKQMLATQLEYYFSRENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVLRESP 330
Fly 331 NVQVDDKGLRVRPNRKRCIIILREISNNTPLDDVKALFSNESCPRPISCEFAANNSWYITFESDE 395
Fly 396 DAQKAYKYLREEVKEFQGKPIMARIKPKSF-INRIQAVPKNGYRLTS--------------PPTA 445
Fly 446 NVFDPAGAGGATVSYAAAQQ-PRYLYTNGAAIAAPASVQYSNPVLI-PIPQNQFYPGLVAGP--- 505
Fly 506 --WPPGTVAATT------AHGQNFYEL---GGNIFTTNP-----LPPQPVTAGFAQAPP------ 548
Fly 549 -----PTSQAMVTPKPQGGGRYNNNHRGNPNNVGGANSG-------------PRAESRSKPP--R 593
Fly 594 STPSASHIQGGNIMPIQITAPIPGGMVSVVP------------TNIVQDPLQPAPLQQQPQQVI- 645
Fly 646 -QQIQQQPSSSAQQQQAATVQMNNTTRHYPIKSNWKGGMQKNLDKSYSGGVATHHHYTTQVQALP 709
Fly 710 AHSHHLQAQQQLQGQTQQQHYQLASSSAASAPQVTYVTTAPAPQQPGQHQHHLVVQQTQPQQQQQ 774
Fly 775 QQQVVLQQQQVQVQELQEAGDGVEHSSHAMQQVNRSSNMSASSSSSLATSMSKEPLQWQNRPRRR 839
Fly 840 839 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Larp4B | NP_647793.1 | LARP_4_5_like | 269..343 | CDD:153400 | 40/73 (55%) |
RRM_LARP4_5_like | 348..423 | CDD:240876 | 49/74 (66%) | ||
larp4b | XP_021325871.1 | LARP_5 | 1279..1353 | CDD:153405 | 40/73 (55%) |
RRM_LARP5 | 1358..1434 | CDD:241150 | 49/75 (65%) | ||
Atrophin-1 | <1632..1862 | CDD:331285 | 51/273 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170586334 | |
Domainoid | 1 | 1.000 | 191 | 1.000 | Domainoid score | I3180 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2591 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 263 | 1.000 | Inparanoid score | I3073 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002064 | |
OrthoInspector | 1 | 1.000 | - | - | otm24760 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR22792 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3384 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.880 |