Sequence 1: | NP_647793.1 | Gene: | Larp4B / 38399 | FlyBaseID: | FBgn0035424 | Length: | 1531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524795.2 | Gene: | Larp7 / 44900 | FlyBaseID: | FBgn0260771 | Length: | 595 | Species: | Drosophila melanogaster |
Alignment Length: | 607 | Identity: | 113/607 - (18%) |
---|---|---|---|
Similarity: | 200/607 - (32%) | Gaps: | 223/607 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 219 PQPHQIVVPVQVPVQVPVPVQLPANGSADPQQGSHNAAGGEEPNIPLDKLKQMLAT----QLEYY 279
Fly 280 FSRENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVLRESPNVQVDDKGLRVR-- 342
Fly 343 ---PNRKRC---IIILREISNNTPLDDVKALFSNESCPRPISC----------EFAANNSWYITF 391
Fly 392 ESDEDAQKAYKYLRE---------------EVKEFQGKPIMAR--IKPKSFINRIQAVPKNGYR- 438
Fly 439 --------------------------LTSPPTANVFDPAGAGGATVSYAAAQQPRYLYTNGAAIA 477
Fly 478 ------------------APASVQYSNPVLIP------------------------------IPQ 494
Fly 495 NQFYPGLVAGPWPPGTVAATTAHGQNFYELGGNIFTTNPLPPQP----------VTAGFAQAPPP 549
Fly 550 TSQAMVTPKPQGGGRYNNNHRGNPN--NVGGANSGPRAESRSKPP--RSTPSASHIQGGNIMPIQ 610
Fly 611 ITAPIPGGMVSVVPTNIVQDPLQPAPLQQQPQQVIQQIQQ----------QPSSSAQQQQAATVQ 665
Fly 666 MNNTTRHYPIKSNWKGGMQKNL 687 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Larp4B | NP_647793.1 | LARP_4_5_like | 269..343 | CDD:153400 | 25/82 (30%) |
RRM_LARP4_5_like | 348..423 | CDD:240876 | 18/104 (17%) | ||
Larp7 | NP_524795.2 | LA | 57..135 | CDD:128955 | 24/77 (31%) |
RRM | <116..>208 | CDD:223796 | 21/96 (22%) | ||
RRM1_LARP7 | 148..>209 | CDD:240736 | 15/65 (23%) | ||
RRM2_LARP7 | 471..548 | CDD:240986 | 17/94 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45456176 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR22792 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |