Sequence 1: | NP_647793.1 | Gene: | Larp4B / 38399 | FlyBaseID: | FBgn0035424 | Length: | 1531 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011242555.1 | Gene: | Larp4b / 217980 | MGIID: | 106330 | Length: | 1723 | Species: | Mus musculus |
Alignment Length: | 966 | Identity: | 253/966 - (26%) |
---|---|---|---|
Similarity: | 376/966 - (38%) | Gaps: | 281/966 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 FGATTQIAASPAAAAAAHIPLITAAAAAAAAAGAPAVAPPVAVAPVATASAAQAAVVPAQQQQQA 102
Fly 103 HPHQAQILAHTHVAHQQQQQQQQQTIQQHLHQQQQQQSPHPAQHLTYGHQPAL-SQA---TAGGS 163
Fly 164 GTISGGAV----GPSGVVVEGQDTNE------YAIMNGA---------LGQTQDGTV-------- 201
Fly 202 -VCYTT--DALN------NTNLVALDPQPHQIVV----------PVQVPVQVPVPVQLPANGSAD 247
Fly 248 PQQGS-----------------------------HNAAGGEE--PNIPLDKLKQMLATQLEYYFS 281
Fly 282 RENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVLRESPNVQVDDKGLRVRPNRK 346
Fly 347 RCIIILREISNNTPLDDVKALFSNESCPRPISCEFAANNSWYITFESDEDAQKAYKYLREEVKEF 411
Fly 412 QGKPIMARIKPKSF-INRIQAVPKNGYRLTSPPTANVFDPAGAGGATVSYAAAQQPRYLYTNGAA 475
Fly 476 IAAPASVQYSNPVLIPIPQNQFYPGLVAGPWPPGTVAATTAHGQNFYELGGNIFTTNPLPPQPVT 540
Fly 541 AGFAQAPPPTSQAMVTPKPQGGGRYNNNHRGNPNNVGGANS-------GPRAESRSKPPRS-TPS 597
Fly 598 ASHIQGGNIMPIQITAPIPGGMVSVVPTNIVQDPL---QPAPLQQQPQQVIQQIQQQPSSSAQQQ 659
Fly 660 QAATVQMNNTTRHYPIKSNWKGGMQKNLDKSYSGGVATHHHYT-TQVQA---------------- 707
Fly 708 ----LPAHSHHLQAQQQLQ--------GQTQQQHYQLASSS---------AASAPQVTYVTTA-- 749
Fly 750 --PAPQQPGQHQHHLVVQQTQPQQQQQQQQV--------VLQQQQVQVQELQEAGDGVEHSSHAM 804
Fly 805 QQVNRSSNMSASSSSSLATSMSKEPL--------QWQNRPRRRRRDEEGGINYSPG 852 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Larp4B | NP_647793.1 | LARP_4_5_like | 269..343 | CDD:153400 | 43/73 (59%) |
RRM_LARP4_5_like | 348..423 | CDD:240876 | 48/74 (65%) | ||
Larp4b | XP_011242555.1 | LARP_5 | 1141..1215 | CDD:153405 | 43/73 (59%) |
RRM_LARP5 | 1220..1296 | CDD:241150 | 48/75 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167841862 | |
Domainoid | 1 | 1.000 | 72 | 1.000 | Domainoid score | I9284 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2591 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002064 | |
OrthoInspector | 1 | 1.000 | - | - | otm42917 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR22792 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3384 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
9 | 8.830 |