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Protein Alignment Larp4B and Larp1b
DIOPT Version :9
Sequence 1: | NP_647793.1 |
Gene: | Larp4B / 38399 |
FlyBaseID: | FBgn0035424 |
Length: | 1531 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001035489.2 |
Gene: | Larp1b / 214048 |
MGIID: | 1914604 |
Length: | 541 |
Species: | Mus musculus |
Alignment Length: | 115 |
Identity: | 40/115 - (34%) |
Similarity: | 63/115 - (54%) |
Gaps: | 10/115 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 264 PLDK--LKQMLATQLEYYFSRENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVL 326
|::: ||:.:..|:|||||.|||..|.:|..:||...::||..:|.|:.|:.||.::|||.|.|
Mouse 415 PVEETLLKEYIKRQIEYYFSTENLERDFFLRRKMDEQGFLPISLIAGFHRVQALTTNLNLILEAL 479
Fly 327 RESPNVQVDDKGLR--VRPNRKRCIIILREISNNTPLDDVKALFSNESCP 374
::|..|::.|:.:| :.|.:.. |......|.|..|...|. .||
Mouse 480 KDSTEVEIVDEKMRKKIEPEKWP---IPGPPPRNVPQTDFSQLI---DCP 523
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167841866 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.840 |
|
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