DRSC/TRiP Functional Genomics Resources

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Protein Alignment nSMase and ISC1

DIOPT Version :10

Sequence 1:NP_647790.1 Gene:nSMase / 38396 FlyBaseID:FBgn0035421 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_010935.1 Gene:ISC1 / 856739 SGDID:S000000821 Length:477 Species:Saccharomyces cerevisiae


Alignment Length:505 Identity:114/505 - (22%)
Similarity:200/505 - (39%) Gaps:142/505 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LNILTLNIWGIPYVSSDRRPRIDAICKELA---------------------SGKYDIVSLQEVWA 49
            :..||.|.||:.|||..|:.|:.||..:||                     :..||:::|||:|.
Yeast    39 IKFLTFNTWGLKYVSKHRKERLRAIADKLAGHSMLTPISDELLPNGGDSNENEDYDVIALQEIWC 103

  Fly    50 QEDSELLQKGTEAVLPHSHYFHSGVM-GAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGK 113
            .||.:.|.....:..|:...||||:: |.||.:|||.||..|..:.:.:||....:...||:.||
Yeast   104 VEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLYRFPINGRPSAVFRGDWYVGK 168

  Fly   114 GVGLCRILVGGQMVHLYNAHLHAEYDNAND-EYKTHRVIQAFDTAQFIEATRGNSALQILAGDLN 177
            .:.:..:..|.:.:.:.|:|:||.|....| .|..||..||:|.::.|:..|......|:.||||
Yeast   169 SIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLN 233

  Fly   178 AQPQDISYKVLLYTSKMLDS----------------------------CDS--DSFRTNECEHNS 212
            ::|..:.:|.|...:.::||                            |||  :::|.       
Yeast   234 SRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIARLSPLQQLLKGCTTCDSLLNTWRA------- 291

  Fly   213 YTSKQARERNP-LGIRIDHIFVRGGDHVNAEIAEYKLPFPERVPGEKFSFSDHEAVMAKLKLFKL 276
                   :|.| ...|:|:..:   |....:..:..:.|.||:|....|.|||.|.         
Yeast   292 -------QRQPDEACRLDYALI---DPDFLQTVDAGVRFTERIPHLDCSVSDHFAY--------- 337

  Fly   277 EPRSEEPVATIEVNCLVEDGETCSVREVGAGDALTGEDDQSSQHQPEIQCNGSSTSIQSMPAART 341
                                 :|::..|          .|.::.:|       |||::.......
Yeast   338 ---------------------SCTLNIV----------PQGTESRP-------STSVKRAKTHDR 364

  Fly   342 AALLEALALCDASLLQLNT----------DRILYYSAATFLFVLLVLLVEFTA-PVGMRTIFLLL 395
            ..:|:..:..:..:..::|          .|.|::.|:..|.:..:::..||| ..|..:||.:|
Yeast   365 ELILQRYSNYETMIECIHTYLKTAQRQKFFRGLHFWASILLLIASLVVTTFTANKAGWSSIFWVL 429

  Fly   396 KFI-------VFGVILFCVFMASIWNYMERNGVLQGKKSMEVMLHHAQKY 438
            ..|       :.|.|.|      ::...|...:::.::.:....||.|.:
Yeast   430 FAIAVSISGTIDGAISF------LFGRSEIRALIEVEQEVLDAEHHLQTF 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nSMaseNP_647790.1 EEP 12..267 CDD:469791 83/308 (27%)
ISC1NP_010935.1 EEP 41..341 CDD:469791 87/346 (25%)

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