DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nSMase and ISC1

DIOPT Version :9

Sequence 1:NP_647790.1 Gene:nSMase / 38396 FlyBaseID:FBgn0035421 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_010935.1 Gene:ISC1 / 856739 SGDID:S000000821 Length:477 Species:Saccharomyces cerevisiae


Alignment Length:505 Identity:114/505 - (22%)
Similarity:200/505 - (39%) Gaps:142/505 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LNILTLNIWGIPYVSSDRRPRIDAICKELA---------------------SGKYDIVSLQEVWA 49
            :..||.|.||:.|||..|:.|:.||..:||                     :..||:::|||:|.
Yeast    39 IKFLTFNTWGLKYVSKHRKERLRAIADKLAGHSMLTPISDELLPNGGDSNENEDYDVIALQEIWC 103

  Fly    50 QEDSELLQKGTEAVLPHSHYFHSGVM-GAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGK 113
            .||.:.|.....:..|:...||||:: |.||.:|||.||..|..:.:.:||....:...||:.||
Yeast   104 VEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLYRFPINGRPSAVFRGDWYVGK 168

  Fly   114 GVGLCRILVGGQMVHLYNAHLHAEYDNAND-EYKTHRVIQAFDTAQFIEATRGNSALQILAGDLN 177
            .:.:..:..|.:.:.:.|:|:||.|....| .|..||..||:|.::.|:..|......|:.||||
Yeast   169 SIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQAWDFSRLIKLYRQAGYAVIVVGDLN 233

  Fly   178 AQPQDISYKVLLYTSKMLDS----------------------------CDS--DSFRTNECEHNS 212
            ::|..:.:|.|...:.::||                            |||  :::|.       
Yeast   234 SRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIARLSPLQQLLKGCTTCDSLLNTWRA------- 291

  Fly   213 YTSKQARERNP-LGIRIDHIFVRGGDHVNAEIAEYKLPFPERVPGEKFSFSDHEAVMAKLKLFKL 276
                   :|.| ...|:|:..:   |....:..:..:.|.||:|....|.|||.|.         
Yeast   292 -------QRQPDEACRLDYALI---DPDFLQTVDAGVRFTERIPHLDCSVSDHFAY--------- 337

  Fly   277 EPRSEEPVATIEVNCLVEDGETCSVREVGAGDALTGEDDQSSQHQPEIQCNGSSTSIQSMPAART 341
                                 :|::..|          .|.::.:|       |||::.......
Yeast   338 ---------------------SCTLNIV----------PQGTESRP-------STSVKRAKTHDR 364

  Fly   342 AALLEALALCDASLLQLNT----------DRILYYSAATFLFVLLVLLVEFTA-PVGMRTIFLLL 395
            ..:|:..:..:..:..::|          .|.|::.|:..|.:..:::..||| ..|..:||.:|
Yeast   365 ELILQRYSNYETMIECIHTYLKTAQRQKFFRGLHFWASILLLIASLVVTTFTANKAGWSSIFWVL 429

  Fly   396 KFI-------VFGVILFCVFMASIWNYMERNGVLQGKKSMEVMLHHAQKY 438
            ..|       :.|.|.|      ::...|...:::.::.:....||.|.:
Yeast   430 FAIAVSISGTIDGAISF------LFGRSEIRALIEVEQEVLDAEHHLQTF 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nSMaseNP_647790.1 EEP 12..267 CDD:294334 83/308 (27%)
ISC1NP_010935.1 EEP 41..341 CDD:412407 87/346 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345351
Domainoid 1 1.000 122 1.000 Domainoid score I1234
eggNOG 1 0.900 - - E1_KOG3873
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I1289
Isobase 1 0.950 - 0 Normalized mean entropy S2849
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003990
OrthoInspector 1 1.000 - - oto99668
orthoMCL 1 0.900 - - OOG6_105043
Panther 1 1.100 - - LDO PTHR12393
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2164
SonicParanoid 1 1.000 - - X2751
TreeFam 1 0.960 - -
1413.730

Return to query results.
Submit another query.