DRSC/TRiP Functional Genomics Resources

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Protein Alignment nSMase and smpd2b

DIOPT Version :9

Sequence 1:NP_647790.1 Gene:nSMase / 38396 FlyBaseID:FBgn0035421 Length:442 Species:Drosophila melanogaster
Sequence 2:XP_001338369.2 Gene:smpd2b / 797914 ZFINID:ZDB-GENE-130530-640 Length:436 Species:Danio rerio


Alignment Length:431 Identity:133/431 - (30%)
Similarity:205/431 - (47%) Gaps:70/431 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LELNILTLNIWGIPYVSSDRRPRIDAICKELASGKYDIVSLQEVWAQEDSELLQKGTEAVLPHSH 68
            ::..:|:||.|||.|:|..|:.|...|.:.|...:.|:..|||||.::|...|:|....|.||||
Zfish     7 IKFRVLSLNCWGIQYLSKKRQERFVLIGELLNQEELDVALLQEVWCEKDFLYLKKKLSTVYPHSH 71

  Fly    69 YFHSGVMGAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGKGVGLCRILVGGQMVHLYNAH 133
            ||.||..|:||.|.|::.|.....:.:|:|||.:..||.||||||.||...:.:.|..||::..|
Zfish    72 YFKSGFFGSGLAVFSRHQIHDAFLYRYSLNGYPYMAQHGDWFGGKAVGKVLLNISGLKVHVFVTH 136

  Fly   134 LHAEYDNANDEYKTHRVIQAFDTAQFIEATRGNSALQILAGDLNAQPQDISYKVLL-YT------ 191
            |||||....|.|.:|||:||::..|||..|...:.:.||.||||..|.|:..::|. ||      
Zfish   137 LHAEYCREKDSYLSHRVVQAWELQQFIRHTSAGADVVILGGDLNMHPDDLGTRLLRNYTGLQDSF 201

  Fly   192 --SKMLDSCDSDSFRTNECEHNSYTSKQARERNPLGIRIDHIFVRGGDHVNA---EIAEYKLPFP 251
              :...|.|:......:|   |.:|..........|||||:|..:|...|:.   .::..|.|  
Zfish   202 TEAATFDGCEGGLTHISE---NPFTLADGLAPFGGGIRIDYIMFKGSGEVDVSCESLSTTKGP-- 261

  Fly   252 ERVPGEKFSFSDHEAVMAKLKLFKLEPRSEEPVATIEVNCLVEDGETCSVREVGAGDALTGEDDQ 316
              |||:.|.:|||||:.|:   |...|              .:.|..|:  |..:|..|   || 
Zfish   262 --VPGQPFPYSDHEALTAQ---FLFTP--------------TKKGNKCA--ENKSGCVL---DD- 301

  Fly   317 SSQHQPEIQCNGSSTSIQSMPAARTAALLEALALCDASLLQLNTDRILYYSAATFLFVLLVLLVE 381
                .||:        :.::..|||.  ::....|        ::.:.|.:|.|.:..|::|::|
Zfish   302 ----LPEL--------VNTVNEARTE--VKVGLHC--------SEGMRYTAARTGIMGLVLLILE 344

  Fly   382 FTA------PVGMRTIFLLLKFIVFGVILFCVFMASIWNYM 416
            ...      .:|....|....|.:.|.:.|.:.::::..|:
Zfish   345 LVIAAIPLFALGAEQPFPKATFYLLGALCFAILLSTLMLYI 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nSMaseNP_647790.1 EEP 12..267 CDD:294334 102/266 (38%)
smpd2bXP_001338369.2 EEP 11..279 CDD:294334 106/277 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590621
Domainoid 1 1.000 178 1.000 Domainoid score I3522
eggNOG 1 0.900 - - E1_KOG3873
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31129
Inparanoid 1 1.050 195 1.000 Inparanoid score I3811
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D573534at33208
OrthoFinder 1 1.000 - - FOG0003990
OrthoInspector 1 1.000 - - otm24857
orthoMCL 1 0.900 - - OOG6_105043
Panther 1 1.100 - - LDO PTHR12393
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2164
SonicParanoid 1 1.000 - - X2751
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.790

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