DRSC/TRiP Functional Genomics Resources

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Protein Alignment nSMase and smpd2a

DIOPT Version :9

Sequence 1:NP_647790.1 Gene:nSMase / 38396 FlyBaseID:FBgn0035421 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001025390.2 Gene:smpd2a / 567548 ZFINID:ZDB-GENE-051014-1 Length:421 Species:Danio rerio


Alignment Length:420 Identity:134/420 - (31%)
Similarity:200/420 - (47%) Gaps:69/420 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LNILTLNIWGIPYVSSDRRPRIDAICKELASGKYDIVSLQEVWAQEDSELLQKGTEAVLPHSHYF 70
            |.:.:||.|||.::|.....|.:.|.:.|...::||..|||||::.|...|::......|::|||
Zfish     9 LRVFSLNCWGIRFLSKLCAQRYEMIGELLGREQHDIALLQEVWSERDFLFLKRKLSCSHPYTHYF 73

  Fly    71 HSGVMGAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGKGVGLCRILVGGQMVHLYNAHLH 135
            .|||:|:||.|.||:.|...|.:.:|:|||.:.:.|.||||||..||..:.|.|...|:|..|||
Zfish    74 KSGVIGSGLAVFSKHRIQDALLYQYSLNGYPYMLSHGDWFGGKAAGLVIVEVFGLKAHVYVTHLH 138

  Fly   136 AEYDNANDEYKTHRVIQAFDTAQFIEATRGNSALQILAGDLNAQPQDISYKVLLYTSKMLDSCDS 200
            |||..|.|.|..||::|:::..||:..|...:.|.||.||||..|||:..: ||.:...|..|.:
Zfish   139 AEYSRAQDGYLPHRIVQSWELQQFVRHTSHGADLVILGGDLNMHPQDLGNR-LLRSHTGLRDCYT 202

  Fly   201 DSFRTNECE-------HNSYTSKQARERNPLGIRIDHIFVRGGDHVNAEIAEYKLPFPERVPGEK 258
            ::.:.:.||       :|.:|.||.......|||||:|.::|...|:.: .|........|..:.
Zfish   203 ETDKFDGCEDGHTLIANNHFTKKQDLIPFEKGIRIDYILIKGSQRVSVK-CESLSTTKGSVSDKP 266

  Fly   259 FSFSDHEAVMAKLKLFKLE------PRSEEPVATIEVNCLVEDGETCSVREVGAGDALTGEDDQS 317
            |.:|||||:||.|.|...:      |.|::.....|...:|::|       :|..:||..     
Zfish   267 FPYSDHEALMADLNLLSSQDCTDAPPASDQMDVVSEARAVVKEG-------LGKTEALRD----- 319

  Fly   318 SQHQPEIQCNGSSTSIQSMPAARTAALLEALALCDASLLQLNTDRILYYSAATFLFVLLVLLVEF 382
                            :|:.......||..|.||.:|...        :|||.||          
Zfish   320 ----------------RSLHLMFAGLLLLLLVLCSSSFFS--------FSAAGFL---------- 350

  Fly   383 TAPVGMRTIFLLLKFIVFGVILFCVFMASI 412
                |...:|:||.    |.:|:.:|...|
Zfish   351 ----GAVCVFILLS----GALLYMLFTTHI 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nSMaseNP_647790.1 EEP 12..267 CDD:294334 99/261 (38%)
smpd2aNP_001025390.2 EEP 11..279 CDD:294334 103/269 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590622
Domainoid 1 1.000 178 1.000 Domainoid score I3522
eggNOG 1 0.900 - - E1_KOG3873
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31129
Inparanoid 1 1.050 195 1.000 Inparanoid score I3811
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D573534at33208
OrthoFinder 1 1.000 - - FOG0003990
OrthoInspector 1 1.000 - - otm24857
orthoMCL 1 0.900 - - OOG6_105043
Panther 1 1.100 - - O PTHR12393
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2164
SonicParanoid 1 1.000 - - X2751
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.790

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