DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32277 and svh-1

DIOPT Version :9

Sequence 1:NP_728835.1 Gene:CG32277 / 38393 FlyBaseID:FBgn0052277 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:263 Identity:69/263 - (26%)
Similarity:116/263 - (44%) Gaps:53/263 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RQGKIFGGKTTLVKDHSFLVNLRRGG--KFRCGGVIISPNCVLTAAHCLEGRYQQVRDLTVHAQQ 85
            |..::.||..|:.....:...||...  ...||..|:....::|||||.|      .|..|.:.:
 Worm   709 RIARVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFE------EDERVSSYE 767

  Fly    86 QCLG--DDMPPEHVRSAWYVGLSPNYCAQRGLDS-DLAVIRLSRPFDIAGNASLVKIDYND---- 143
            ..:|  |:...:.....:|:.....|...:.:.| |:|::.:..|          .|::|:    
 Worm   768 VVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYP----------GIEFNEYAQP 822

  Fly   144 --LP-------PHSNLTVLGWGAINEQGHNWNQCLQEANVKLISHRECIKSVGSGWQKVTNNMFC 199
              ||       |.....|.|||::   |..:.:.||.|.:.:|:..:|:.| ...:..::.:.||
 Worm   823 ICLPSKDFVYTPGRQCVVSGWGSM---GLRYAERLQAALIPIINRFDCVNS-SQIYSSMSRSAFC 883

  Fly   200 ALG--KNARDACQGDSGGPAIYAGRS-------VGIVSWGYGCG-SGYPGVYTRLSSPSITYWLK 254
            | |  :...|:||||||||  :|.|.       .|::|||.||. ...||:|| :.:|.:: |:.
 Worm   884 A-GYLEGGIDSCQGDSGGP--FACRREDGAFVLAGVISWGDGCAQKKQPGIYT-MVAPYLS-WIS 943

  Fly   255 DFI 257
            ..|
 Worm   944 AII 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32277NP_728835.1 Tryp_SPc 26..246 CDD:214473 65/247 (26%)
Tryp_SPc 27..246 CDD:238113 65/246 (26%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 67/256 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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