DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32271 and svh-1

DIOPT Version :9

Sequence 1:NP_728833.1 Gene:CG32271 / 38392 FlyBaseID:FBgn0052271 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:252 Identity:74/252 - (29%)
Similarity:120/252 - (47%) Gaps:40/252 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ASNEANSRIVGGVPVDIASVPYLVNLRIGGN--FMCGGSLVTPQHVVTAAHCV-KGIGASRILVV 78
            |:....:|:|||......:.|:...||....  ..||.|::...|::|||||. :....|...||
 Worm   705 AAKSRIARVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVV 769

  Fly    79 AGVTRLTETGVRSGVDKVYTPKAYNTRTL-----TSDVAVLKLKAPISGPKVSTI--ELCNTS-- 134
            .|.....:|   .|.::::..:..:...|     :.|:|:|::  |..|.:.:..  .:|..|  
 Worm   770 VGDWDNNQT---DGNEQIFYLQRIHFYPLYKDIFSHDIAILEI--PYPGIEFNEYAQPICLPSKD 829

  Fly   135 --FKAGDLIKVSGWGQITERNKAVSMQVR---SVDVALIP---RKACMSQYKLRGTITNTMFCAS 191
              :..|....|||||         ||.:|   .:..||||   |..|::..::..:::.:.|||.
 Worm   830 FVYTPGRQCVVSGWG---------SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAG 885

  Fly   192 -VPGVKDACEGDSGGPAVYQGQ-----LCGIVSWGVGCARKSSPGVYTNVKTVRSFI 242
             :.|..|:|:||||||...:.:     |.|::|||.|||:|..||:||.|....|:|
 Worm   886 YLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32271NP_728833.1 Tryp_SPc 24..242 CDD:214473 72/243 (30%)
Tryp_SPc 25..244 CDD:238113 72/244 (30%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 72/244 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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