DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gry and Trappc11

DIOPT Version :9

Sequence 1:NP_647785.3 Gene:gry / 38391 FlyBaseID:FBgn0286567 Length:1320 Species:Drosophila melanogaster
Sequence 2:NP_796214.2 Gene:Trappc11 / 320714 MGIID:2444585 Length:1133 Species:Mus musculus


Alignment Length:1356 Identity:387/1356 - (28%)
Similarity:603/1356 - (44%) Gaps:295/1356 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PSELLVTPQPLVGFCGLDTARVSVHKAVWEAFSGSLQRKAADRAAVQYKLLPPNYEFPVAKPKRA 73
            |.||...|...|...|||....:||:|||:||..:   :.|||..:.:|:||.::|:|..:.||.
Mouse     9 PVELCCRPMAFVTLTGLDVVYNAVHRAVWDAFCAN---RRADRVPISFKVLPGDHEYPKCRSKRT 70

  Fly    74 SYEWYHPKGILKRNWMLKHLHVLPSVVVLFQDMEWNDLQWTEKQVQCAAIVQALKNTLQERNTRL 138
            |||||.|||:||..||.|||:::|::||:|.:::|::.||.|||.:||..|:.::.:||.|||::
Mouse    71 SYEWYIPKGVLKTGWMNKHLNLVPALVVVFYELDWDEPQWKEKQSECATRVEIVRQSLQGRNTKV 135

  Fly   139 CLVLLQRAAPLPPGEDLLAAERAASLTNACGITSKMLFILPHTEHLTGYALRLESAFLDMAQSYY 203
            .:||:|:..|||||||::|:||||:|.|.|.::.|.||:||||:||.||.:|||:||.:.||:||
Mouse   136 AVVLIQKKTPLPPGEDVIASERAAALCNVCELSGKSLFVLPHTDHLVGYIIRLENAFYEHAQTYY 200

  Fly   204 ALMSKRIRNHRDQLT-AAHTSLKIRHQFKLGFVAEMRQDFSTGQKHYFQAYANLDEIRINDGNCL 267
            ....:|:::|::.|. ..|..|.:|||||:.|.:|::||.....|:|..||..:.|:|.::.|.|
Mouse   201 YTEIRRVKSHKEFLNKTTHQLLFVRHQFKIAFFSELKQDTQNALKNYRIAYNLVHELRAHETNIL 265

  Fly   268 EIKTLAGFLNYKICRLMFKLKTPRDAINQFIIHVEKHKSRVGFKDLAFEHHAWLSTQHSVFAELF 332
            ||||:|||:|||||||.|:..||.|||.||..|::..|.::|..:|||||.||::.|...|.:||
Mouse   266 EIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHIDLCKKKIGSAELAFEHAAWMAKQFQAFGDLF 330

  Fly   333 CEAIKNGLPALQTQHPGIYYHKAAEFVMKRRDAAMEAYAAMQASSEATPTPIQNPLSLYT---EF 394
            .||||.||.|:|||:||.||.:||.:..:|:..|    .|:.....|...|..:||...:   :|
Mouse   331 DEAIKLGLTAIQTQNPGFYYQQAAYYAQERKQHA----KALCNHDAAVMYPNPDPLETQSGVLDF 391

  Fly   395 FGIRAVKTG-------DLVAEQQANMQLCDQERSYNHSAAIIALLSQAMAQFKIYKCLRFRKKLA 452
            :|.|..:.|       |...|:...:.:..:|||..||..||||||.|:||||.|||.|.:..|.
Mouse   392 YGQRPWRQGILSFDLSDPEKEKAGILAIQLKERSVVHSEIIIALLSNAVAQFKKYKCPRMKSHLM 456

  Fly   453 IDMAEEYLKSGDHAKALTLYSLMLPDYRQEKWTTIFTDVLLKTLRCALLSGSVADYIACSVEALS 517
            :.|.|||..:.|:.|||.|...::.|||.|.|.|:.|.:|...|:|:.|...:.|||..|:|.|.
Mouse   457 VQMGEEYYYAKDYTKALKLLDYVMCDYRSEAWWTLLTSILTTALKCSYLMAQLKDYITYSLELLG 521

  Fly   518 LRHQSDQSERILILENLWQVFQGVPPMPKTQ----LTPEAQALWTSALANVKSPI-QIDLDKVND 577
            ........::..|.:||..|.....|.|:..    ....||.||...::...|.: ||.:.....
Mouse   522 RASTLKDEQKSRIEKNLMNVLMNESPDPEPDCDVLAVKTAQKLWADRVSLAGSNVFQIGVQDFVP 586

  Fly   578 VVEMCATFERVQLSNDDLLQLQLIVRVLTDIPLRIRSFHVILADAGNPQNSYKLEALKYFCFPTL 642
            .|:..|.|.......|..::..:.::.....|:|.....|          |:..:....||    
Mouse   587 FVQCKAKFHAPSFHVDVPVEFDVFLKADCPHPIRFSKLCV----------SFNNQVYNQFC---- 637

  Fly   643 TQLRGQKQPDDEQLENPSQEPKNFEKNMRLEPGSYYQLFCSTEAQQFHENTQLRIVRLEAHMGTD 707
              :..:.....|.|||.:|      ..|.|.||...:|.....|:......::.|..::..:|::
Mouse   638 --VLEEASKASEVLENLTQ------GKMCLVPGKTRKLSFKFVAKTEDVGKKIEITSVDLFLGSE 694

  Fly   708 QVAALL---------TCSSNYSRQLFRHHTRSRDL-DDNVTINPICYIAPTFHLDTQTNLG-H-G 760
            ....::         ..||..:.|..|...|...| :|.:..:.:...|.|..:....|:. | .
Mouse   695 SGRCVVLSWQGGGGDAASSQEALQAARSFKRRPKLAEDEIHWDSVIIQASTMIISRVPNISVHLR 759

  Fly   761 HDNGLTDDKEMVATKMLVNEYFPVVTTVSNPYNVYLQNVGVHISIPVGLRNSVFLTTDISPGR-- 823
            |:           ...|:||.:.:|.||.:           |...|:   ..|.||..:.||:  
Mouse   760 HE-----------PPALMNEMYCLVVTVQS-----------HEKSPI---RDVKLTAGLKPGQDA 799

  Fly   824 ---QKLHSQIQIDVGELSAHGSNTA-TFYIFSLTE---AEIKLAQRLSYTLDVDRGPGGGGSNAR 881
               ||.|         ::.||:... ..|...||:   .::...::|..|:.|..|..|      
Mouse   800 NLTQKTH---------VTLHGAELCDESYPALLTDIPVGDLHPGEQLEKTVYVRCGTVG------ 849

  Fly   882 VSTAPNSSESTPDHEVKSVIPSVAAISPVQIEYLDETRL-------RKSREDTLTVRCYGDFKFN 939
                                   :.:..|.:.||..|.:       :..::||:|:.....|...
Mouse   850 -----------------------SRMFLVYVSYLINTTVEGKEIICKCHKDDTVTIETVFPFDVA 891

  Fly   940 ARFYTMDRKPLNQVYRGENFLLRANTEVVAVDDVEILDSFFICDHNLVQSNYSFKQKKYTNKYSA 1004
            .||.:...:.|.:||....|||.  |:|::..                                 
Mouse   892 VRFVSTKFEHLERVYADIPFLLM--TDVLSAS--------------------------------- 921

  Fly  1005 GEQLESVIVLRTNATLRDWATARDLDHRGKLEGKAVASKFIRPVPKPSSEEPLAPTPPAGISAYM 1069
                             .||                       :...|||..|||:..|     |
Mouse   922 -----------------PWA-----------------------LTIVSSELQLAPSMTA-----M 941

  Fly  1070 S--KSLVTKIPTTMTIINSNSAVSN--ALQVANAGVMSNSTQSDDVNVAEEAINTHEGIKTTRLI 1130
            .  :|.:.|:     ::.:..:.|.  .|:..:||                  |...|:      
Mouse   942 DHLESQIDKV-----VLQTGESASECFCLRCPSAG------------------NIEGGV------ 977

  Fly  1131 YNKALEAVQGTGHCRGFIKKIYTLEGNPSAVPIFGVFCIRWRRANCKEENESKFVIRGLD--IAE 1193
                     .|||                       :.|.|:||:..|...:...:..|.  |||
Mouse   978 ---------ATGH-----------------------YIISWKRASVVESIPAVSTVITLPHVIAE 1010

  Fly  1194 P-PLNIYCTIEEKMFVKMPMAFKVVLKNPTTHVLHLIANLSISKTDNFICSGHKQLDISIMAYEE 1257
            . ||::...:.....|:..:..:..|:|.|..|..:  .:|:..:|.|:.||.||:.:.|:...:
Mouse  1011 NIPLHVNADLPSFGRVRESLPVRYHLQNKTDLVQDV--EISVEPSDAFMFSGLKQIRLRILPGTK 1073

  Fly  1258 KELVYNLYPLQVGWQELPVLSLEYNTKADPQKKDSQNALLDELVQRALPKRVFVLP 1313
            :|::||.|||..|:|:||  ||..|....|.       ..::|::|.:|..:||.|
Mouse  1074 QEMLYNFYPLMAGYQQLP--SLNINLLRFPN-------FTNQLLRRFIPTSIFVKP 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gryNP_647785.3 Foie-gras_1 265..518 CDD:288650 114/262 (44%)
Gryzun-like 1232..1275 CDD:289511 16/42 (38%)
Trappc11NP_796214.2 Foie-gras_1 263..522 CDD:288650 114/262 (44%)
Gryzun-like 1036..1095 CDD:289511 24/62 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849324
Domainoid 1 1.000 255 1.000 Domainoid score I2035
eggNOG 1 0.900 - - E1_KOG4386
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11076
Inparanoid 1 1.050 523 1.000 Inparanoid score I1243
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005523
OrthoInspector 1 1.000 - - oto95366
orthoMCL 1 0.900 - - OOG6_103774
Panther 1 1.100 - - LDO PTHR14374
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3614
SonicParanoid 1 1.000 - - X3946
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.780

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