Sequence 1: | NP_647780.1 | Gene: | Girdin / 38385 | FlyBaseID: | FBgn0283724 | Length: | 1381 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_080957.2 | Gene: | Ccdc88c / 68339 | MGIID: | 1915589 | Length: | 2009 | Species: | Mus musculus |
Alignment Length: | 1691 | Identity: | 449/1691 - (26%) |
---|---|---|---|
Similarity: | 736/1691 - (43%) | Gaps: | 424/1691 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 IDEFVNSSIISWLESC----LPRAELLAGYTSLLDGHIIHSVWLQIDPEPQN---NPSELNDLNG 69
Fly 70 KSLSIARAKNFECVVRNLKSFFEEELGQTILV-LPDAFTLGHHPESKNGLEQMKTLLTLLLGAAV 133
Fly 134 QCPNKELFIARIKELDLETQHAIVGLIKQVTDSHSLV----------LTEDSLERLTPQSMYTHI 188
Fly 189 LRLTKERDVMYLKWIDLACVE--TEMTASDNLVECGQGVSVTRSPSNGTATSTPSSSSNSESNHL 251
Fly 252 AVECADLRSKNRKLRQELEEKSENLLELREELDDKKARFDKLRQESQEWFTEAKRASAYRDEVDI 316
Fly 317 LRERAERADRLEVEVQKYREKLGDSDFYKSRVEELREDNRVLLESKEMLEEQLQRYRKRSEHAIS 381
Fly 382 LESEIIKYKQKINDMALERDVDRSKLEELLEENSQLQLVAR-NLNSTMDLD---KSFSENEDDCN 442
Fly 443 SGDNSLSEQLTNNAQTRALKLELENRRLTAALEQLKESS--FHESTSKMLELEKEKKKLSLKIEQ 505
Fly 506 MQENINRLTQQNVELEGVFKNALEENKKLQDAV-------------------------------- 538
Fly 539 ----------DNR--------------QKSYDRQSLEREADRQK--------------------- 558
Fly 559 --------LSDAEQHVETLNKEKQRIQTLNESIQRRADDLERLA--------------------- 594
Fly 595 ----------------ESKTKELEQYLE--------------KSRQYELTKQ------------- 616
Fly 617 ------------KLYEIEA-------------------------------RVSTYERENASLLKE 638
Fly 639 VSKLKEGSEQKSVQLDDSINRLDVQSKELQKLGKALEDSEQVHQKLVELEKQNQELASQRIIDQE 703
Fly 704 MISTLRNDLVTGTLVTK-------KVRNNLEKLGLA-------DEEPGE--------------LN 740
Fly 741 VEHVV--EKLVRNPETFKTVREIMLNVTREQLEE--EEREGGVKSDMC-------VLCHRQ---- 790
Fly 791 ---------EIFTV-EKNIELAATPAPAPAQP----------SSQELRFEHKVRLSPARESAELT 835
Fly 836 RIKDSNTQLQTENARLSVDVAALGSQITSLNTQHVALQLANSQLAAEKDSLLKEIDSLQQEHKHA 900
Fly 901 LQDQVTLQCLHDQLSAEYESLNKDKEQLKAAVRDLRQELRDTREQQSALEQRIEELTIQNSNMKT 965
Fly 966 CSEDL-SILRTEHSKLTDDFR-NLFATSD--RFKNEYKNIQEQYKMVRMEHSSLKLQNTELSGEL 1026
Fly 1027 NAK--------------SDQVRCLQMEYSKVQQRCEMLIQNNAELDSERKALMDNVSQLLSQYQE 1077
Fly 1078 LLAISLEDKKHFHEEEKNYTERVHSLKRQKEKLEEKIMEHYKKSETTVHKKKPF--ASMLVRRVK 1140
Fly 1141 KAS--------------------SDLMNKVPSRNRRS-------------WVDDARTNSQFV--- 1169
Fly 1170 -------IGSESGG--NESDNSNE--------EP----LSIASDTHLLQRNVPLRQSLQR----- 1208
Fly 1209 ---DLLDNSIQRGGAVRSSLQAQKRTDLNNSRRNSVHGSLEAP-DVTGSS--------------- 1254
Fly 1255 ------LTLGTAGSRRTVYLIDEHQKLPDGSTPGATQS-QSVGGSGSVNAAPPTPAEPQTPQKST 1312
Fly 1313 E 1313 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Girdin | NP_647780.1 | SMC_prok_B | 315..1112 | CDD:274008 | 275/1075 (26%) |
SynN | 884..1006 | CDD:294095 | 36/125 (29%) | ||
Ccdc88c | NP_080957.2 | HOOK | 17..562 | CDD:283312 | 201/560 (36%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 221..251 | 7/29 (24%) | |||
JAKMIP_CC3 | <477..628 | CDD:292653 | 31/150 (21%) | ||
SCP-1 | 507..1243 | CDD:114219 | 161/750 (21%) | ||
RILP-like | <737..841 | CDD:304877 | 13/103 (13%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1002..1036 | 6/33 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1410..1716 | 50/259 (19%) | |||
GBA. /evidence=ECO:0000250|UniProtKB:Q9P219 | 1652..1683 | 3/13 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1757..1787 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1808..2009 | ||||
PDZ-binding. /evidence=ECO:0000255 | 2006..2009 | ||||
DVL1-binding. /evidence=ECO:0000269|PubMed:14750955 | 2007..2009 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167831628 | |
Domainoid | 1 | 1.000 | 322 | 1.000 | Domainoid score | I1213 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 406 | 1.000 | Inparanoid score | I1871 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D38555at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002681 | |
OrthoInspector | 1 | 1.000 | - | - | otm43064 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104888 | |
Panther | 1 | 1.100 | - | - | O | PTHR18947 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3090 |
SonicParanoid | 1 | 1.000 | - | - | X2052 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.930 |