Sequence 1: | NP_647780.1 | Gene: | Girdin / 38385 | FlyBaseID: | FBgn0283724 | Length: | 1381 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002933247.3 | Gene: | ccdc88c / 100485260 | XenbaseID: | XB-GENE-1033686 | Length: | 2058 | Species: | Xenopus tropicalis |
Alignment Length: | 1660 | Identity: | 446/1660 - (26%) |
---|---|---|---|
Similarity: | 731/1660 - (44%) | Gaps: | 372/1660 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 IDEFVNSSIISWLESCLP----RAELLAGYTSLLDGHIIHSVWLQIDPEPQN---NPSELNDLNG 69
Fly 70 KSLSIARAKNFECVVRNLKSFFEEELGQTILV-LPDAFTLGHHPESKNGLEQMKTLLTLLLGAAV 133
Fly 134 QCPNKELFIARIKELDLETQHAIVGLIKQVTDSHSLV----------LTEDSLERLTPQSMYTHI 188
Fly 189 LRLTKERDVMYLKWIDLACVE--TEMTASDNLVECGQGVSVTRSPSNGTATSTPSSSSNSESNHL 251
Fly 252 AVECADLRSKNRKLRQELEEKSENLLELREELDDKKARFDKLRQESQEWFTEAKRASAYRDEVDI 316
Fly 317 LRERAERADRLEVEVQKYREKLGDSDFYKSRVEELREDNRVLLESKEMLEEQLQRYRKRSEHAIS 381
Fly 382 LESEIIKYKQKINDMALERDVDRSKLEELLEENSQLQLVAR-NLNSTMDLDKSFSE--NEDDCNS 443
Fly 444 GDNSLSEQLTNNAQTRALKLELENRRLTAALEQLKESS--FHESTSKMLELEKEKKKLSLKIEQM 506
Fly 507 QENINRLTQQNVELEGVFKNALEENKKLQDAVDNRQKSYDRQSLEREADRQKLS----------- 560
Fly 561 -------------------------------------------DAEQHVETLNK---EKQRIQTL 579
Fly 580 NESIQRRADDLERLAESKTKELEQ----------YLEKS-----------------------RQY 611
Fly 612 ELTKQKLYEIEA------RVSTYERENASLLKEVSKLKEGSE------QKSVQLDDSI------- 657
Fly 658 ----NRLDVQSKELQKLGKALEDSEQVH---QKLVE----------------------------- 686
Fly 687 -------------------------------------------------------LEKQNQELAS 696
Fly 697 QRIIDQEMISTLRNDLVTGTLVTKKVRNNLEKLGLADEEPGELNVEHVVEKLVRNPE-------- 753
Fly 754 ----TFKTVREIMLN-------------VTREQLEEE-------------EREGGVKSDMCVL-- 786
Fly 787 ---CHRQ---------EIFTV-EKNIELAATPAPAPAQP----------SSQELRFEHKVRLSPA 828
Fly 829 RESAELTRIKDSNTQLQTENARLSVDVAALGSQITSLNTQHVALQLANSQLAAEKDSLLKEIDSL 893
Fly 894 QQEHKHALQDQVTLQCLHDQLSAEYESLNKDKEQLKAAVRDLRQELRDTREQQSALEQRIEELTI 958
Fly 959 QNSNMKTCSEDLSILR-------TEHSKLTDDFRNLFATSDRFKNEYKNIQEQYKMVRMEHSSLK 1016
Fly 1017 LQNTELSGELNAKSDQVRCLQMEYSKVQQRCEMLIQNNAELDSERKALMDNVSQLLSQYQELLAI 1081
Fly 1082 SLEDKKHFHEEEKNYTERVHSLKRQKEKLEEKIMEHYKKSETTVHKK------KPFASMLVRRVK 1140
Fly 1141 KASSDLMNKVPSRNRRSWVDDARTNSQFVIGSESGGN--ESDNSNEEPLSIASD----THLLQRN 1199
Fly 1200 VPLRQSLQRDLLDNSIQRGGAVRSSLQAQKRTD----LNNSRR----------NSVHGSLEAPDV 1250
Fly 1251 TGSSLTL-GTAGSRRTVYLIDEHQKLPD--GSTPGATQSQSVGGSGSVNAAPPTPAEPQTPQKST 1312
Fly 1313 ENNAPVGPATFLMYN--RINTTIGGASNSGDQSPL 1345 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Girdin | NP_647780.1 | SMC_prok_B | 315..1112 | CDD:274008 | 269/1071 (25%) |
SynN | 884..1006 | CDD:294095 | 34/128 (27%) | ||
ccdc88c | XP_002933247.3 | HkD_SF | 12..164 | CDD:425405 | 57/157 (36%) |
Smc | <246..629 | CDD:224117 | 130/382 (34%) | ||
Smc | 464..1326 | CDD:224117 | 187/871 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 326 | 1.000 | Domainoid score | I1187 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 426 | 1.000 | Inparanoid score | I1718 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D38555at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002681 | |
OrthoInspector | 1 | 1.000 | - | - | otm48191 | |
Panther | 1 | 1.100 | - | - | O | PTHR18947 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2052 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.160 |