DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14964 and mybph

DIOPT Version :9

Sequence 1:NP_647779.2 Gene:CG14964 / 38384 FlyBaseID:FBgn0035410 Length:1443 Species:Drosophila melanogaster
Sequence 2:NP_001039258.1 Gene:mybph / 734124 XenbaseID:XB-GENE-1018430 Length:507 Species:Xenopus tropicalis


Alignment Length:543 Identity:117/543 - (21%)
Similarity:176/543 - (32%) Gaps:193/543 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ERPSPPGRP-------------ILTPVALPEQQPDVV---------------------------- 50
            |.|:||..|             ..||.|.||:.|:||                            
 Frog    55 EAPAPPTEPPAPEAEVSVPAPETPTPAAEPEKAPEVVEPPPPEPKEEPPSEPTDLTVDEIDDTSI 119

  Fly    51 NLRWDRPLHDGGSPITGYTVEHRRMGSPHWVRATPTPVDRCDVCISGLEPGWRYQFRCFAENIVG 115
            :|:|..|..:|.:.:.||.:|:::.||..|:.....|.......|..|..|              
 Frog   120 SLKWKAPEKEGTTALDGYLLEYQKEGSQEWIAVNKEPSVSTRYKIQNLNTG-------------- 170

  Fly   116 RSDASELSDPLTV---TLQRNAITVPRFIDELVDTNAVEDERIEFRVRILGEPPPEINWFKDGYE 177
                    |.:||   .:.:...:.||.::..|....:.|.                        
 Frog   171 --------DKITVCVKAVSKAGSSAPRALENFVQIREIVDR------------------------ 203

  Fly   178 IFSSRRTKIVNDNEASVLVIHQVALTDEGEIKCTATNRAGHVITKARLMVQAPPKIRLPRTYEDG 242
                                                                 |||||||.....
 Frog   204 -----------------------------------------------------PKIRLPRYLRQT 215

  Fly   243 LIVEADEVLRLKVGVAGQPPPAITWLHEGEVIAPGGRFEVSNTEKNSLLKIDNVLREDRGEYMVK 307
            .:....|.:.|.:...|:|.|.:.|...|:.:.| ....|.|:|.:::|.|.|..|:|.|.|.:.
 Frog   216 FVKHVGEAVNLVIPFQGKPRPQVNWTKNGQPLDP-KHASVRNSESDTILFIRNAERKDSGTYELT 279

  Fly   308 AWNRLGEDSTSFLVTVTARPNPPGTPKLNMSFGKSATLSWTAPLDDGGCKIGNYIV--------E 364
            ......||.....:.:..||.||.:.||...:|.:|.|.||.|||||...|..|.|        |
 Frog   280 VQIDTLEDKAKIEIKIAERPGPPKSIKLLDVWGFNAALEWTPPLDDGNSDITGYTVQKADKKTGE 344

  Fly   365 YFRVGWNVWLKAATTRALSTTLHDLIEGSEYKFRVKAENPYGLSEPSGESELLFIPDPKRGITKP 429
            :|.|..:.       |..:.|:.|||.|:.|.|||.:||..||||             |..:.|.
 Frog   345 WFTVQEHY-------RQTNCTVSDLIMGNSYYFRVFSENLCGLSE-------------KAAVIKD 389

  Fly   430 KSATRIAGDEKDKPKTGAGGMQVPPRRKTLSPPRPQADASTGMSPKQSPSAKRKPKPQLI--DNE 492
            .:..:..|.....|:........||:   .:.|......:||.|.|.....:..|||:::  .|:
 Frog   390 AAVIKKTGITYKPPEYKERDFAEPPK---FTQPLANRATTTGYSTKLFCCVRGSPKPRIVWLKNQ 451

  Fly   493 QLTHEMSYGTSDHALKMDVRKSP 515
                            |::|:.|
 Frog   452 ----------------MEIREDP 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14964NP_647779.2 FN3 29..127 CDD:238020 27/138 (20%)
I-set 138..227 CDD:254352 4/88 (5%)
Ig 155..224 CDD:143165 0/68 (0%)
IG_like 243..323 CDD:214653 20/79 (25%)
Ig 250..323 CDD:299845 19/72 (26%)
FN3 327..411 CDD:238020 37/91 (41%)
mybphNP_001039258.1 FN3 107..195 CDD:238020 19/109 (17%)
Ig_Titin_like 223..295 CDD:319305 19/72 (26%)
FN3 299..382 CDD:238020 35/89 (39%)
I-set 414..503 CDD:369462 13/64 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000709
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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