DRSC/TRiP Functional Genomics Resources

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Protein Alignment MnM and Fndc3b

DIOPT Version :10

Sequence 1:NP_647779.2 Gene:MnM / 38384 FlyBaseID:FBgn0035410 Length:1443 Species:Drosophila melanogaster
Sequence 2:NP_775274.2 Gene:Fndc3b / 72007 MGIID:1919257 Length:1207 Species:Mus musculus


Alignment Length:616 Identity:132/616 - (21%)
Similarity:217/616 - (35%) Gaps:204/616 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SAERPSPPGRPILT-PVALPEQQPDVVNLRWDRPLHDGGSPITGYTVEHRRMGSPHWVRATPTPV 88
            |.:||.||.||::. ||.     ....:::||.|..:|||.|..|.:|         :....:..
Mouse   571 SPDRPGPPTRPLIKGPVT-----SHGFSVKWDAPKDNGGSEILKYLLE---------ITDGTSEA 621

  Fly    89 DRCDVCISG---------LEPGWRYQFRCFAENIVGRSDASELSDPLTVTLQRNAITVPRFIDEL 144
            .:.:|..||         |:||..|:.|....:..|.|..||.....|::|.......|      
Mouse   622 GQWEVAYSGSATEYVFTHLKPGTLYKLRACCISTGGHSQCSESLPVRTLSLAPGQCRPP------ 680

  Fly   145 VDTNAVEDERIEFRVRILGEPPPE---INW----FKDGYEI--FSSRRTKIVNDNEASVLVIHQV 200
                           |:||.|..:   :.|    .:.|.|:  :|...|:  .:|.||. |.|  
Mouse   681 ---------------RVLGRPKHKGVHLEWDVPASESGCEVSEYSVEMTE--PENVASE-VYH-- 725

  Fly   201 ALTDEGEIKCTATNRAGHVITKARLMVQAPPKIRLPRTYEDGLIVEADEVLRLKVGVAGQPP--- 262
                ..|::||..|.....:.:.|:           |...||......:|  .::..|..||   
Mouse   726 ----GPELECTVGNLLPGTVYRFRV-----------RALNDGGYGPYSDV--SEITTAAGPPGQC 773

  Fly   263 --PAITWLHEGEVI-------APGG-----RFEVSNTEK---------NSLLKIDNVLREDRGEY 304
              |.:::..:|.|:       :||.     |.|....|:         ::..::.::|...:...
Mouse   774 RAPRVSFTPDGCVLVGWESPASPGADISEYRLEWGEDEQSLELVYHGPDTCFEMRDLLPAAQYCC 838

  Fly   305 MVKAWNRLGEDSTSFLV---TVTARPNP---------------PGTPKLNMSFGKSATLSWTAPL 351
            .::|:|..|....|.||   |..:.|:|               |.:|.:.:      .|:|..| 
Mouse   839 RLQAFNPAGAGPYSELVHCQTPASAPDPVSTLCVLEEEPPSAHPDSPSVCL------VLNWEEP- 896

  Fly   352 DDGGCKIGNYIVEYFRVGWNVWLKAATTRALSTTLH---DLIEGSEYKFRVKAENPYGLSEPSGE 413
                |..|:.|:.|     |:.|..:.....:||.|   :|:..:.|:.|::|.|..|:. |..:
Mouse   897 ----CNNGSEILAY-----NIDLGDSCITVGNTTTHVMKNLLPETTYRIRIQAINEIGVG-PFSQ 951

  Fly   414 SELLFI--------PDPKR---GITKPKSATRIAGDEKDKPKTGAGG-----MQVPPRRKTLSPP 462
                ||        |.|.|   ..:.|:|.....||...  ||.|.|     :|:..|.|..   
Mouse   952 ----FIKAKTRPLPPSPPRLECAASGPQSLKLKWGDSNS--KTHAAGDMVYTLQLEDRNKRF--- 1007

  Fly   463 RPQADASTGMSPKQSPSAKRKPKPQLIDNEQLTHEMSYGTSDHALKMDVRKSPSLNSADSANKPT 527
                     :|..:.||...|.       ::||....|.....|:            :::...|.
Mouse  1008 ---------ISIYRGPSHTYKV-------QRLTEFTCYSFRIQAM------------SEAGEGPY 1044

  Fly   528 TDSSNPKLNLTLVTTTLAPLDKSVPSPKAPR 558
            :::      .|..||...|     |:.||||
Mouse  1045 SET------YTFSTTKSVP-----PTLKAPR 1064

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MnMNP_647779.2 FN3 29..127 CDD:238020 28/107 (26%)
I-set 138..227 CDD:400151 20/97 (21%)
Ig strand B 155..159 CDD:409565 0/3 (0%)
Ig strand C 168..172 CDD:409565 1/10 (10%)
Ig strand E 194..197 CDD:409565 0/2 (0%)
Ig strand F 207..212 CDD:409565 2/4 (50%)
Ig strand G 220..223 CDD:409565 0/2 (0%)
Ig 243..323 CDD:472250 19/108 (18%)
Ig strand B 251..255 CDD:409353 0/3 (0%)
Ig strand C 264..268 CDD:409353 0/3 (0%)
Ig strand E 289..293 CDD:409353 0/3 (0%)
Ig strand F 303..308 CDD:409353 0/4 (0%)
Ig strand G 316..319 CDD:409353 0/2 (0%)
FN3 327..411 CDD:238020 22/101 (22%)
PHA03247 <420..718 CDD:223021 32/147 (22%)
Fndc3bNP_775274.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..213
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..265
FN3 283..377 CDD:238020
FN3 382..473 CDD:238020
FN3 481..570 CDD:238020
FN3 <540..>799 CDD:442628 64/284 (23%)
FN3 <832..>1066 CDD:442628 64/298 (21%)
FN3 <1017..>1149 CDD:442628 15/78 (19%)
Blue background indicates that the domain is not in the aligned region.

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