DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14964 and Fndc3b

DIOPT Version :9

Sequence 1:NP_647779.2 Gene:CG14964 / 38384 FlyBaseID:FBgn0035410 Length:1443 Species:Drosophila melanogaster
Sequence 2:NP_001343882.1 Gene:Fndc3b / 72007 MGIID:1919257 Length:1207 Species:Mus musculus


Alignment Length:616 Identity:132/616 - (21%)
Similarity:217/616 - (35%) Gaps:204/616 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SAERPSPPGRPILT-PVALPEQQPDVVNLRWDRPLHDGGSPITGYTVEHRRMGSPHWVRATPTPV 88
            |.:||.||.||::. ||.     ....:::||.|..:|||.|..|.:|         :....:..
Mouse   571 SPDRPGPPTRPLIKGPVT-----SHGFSVKWDAPKDNGGSEILKYLLE---------ITDGTSEA 621

  Fly    89 DRCDVCISG---------LEPGWRYQFRCFAENIVGRSDASELSDPLTVTLQRNAITVPRFIDEL 144
            .:.:|..||         |:||..|:.|....:..|.|..||.....|::|.......|      
Mouse   622 GQWEVAYSGSATEYVFTHLKPGTLYKLRACCISTGGHSQCSESLPVRTLSLAPGQCRPP------ 680

  Fly   145 VDTNAVEDERIEFRVRILGEPPPE---INW----FKDGYEI--FSSRRTKIVNDNEASVLVIHQV 200
                           |:||.|..:   :.|    .:.|.|:  :|...|:  .:|.||. |.|  
Mouse   681 ---------------RVLGRPKHKGVHLEWDVPASESGCEVSEYSVEMTE--PENVASE-VYH-- 725

  Fly   201 ALTDEGEIKCTATNRAGHVITKARLMVQAPPKIRLPRTYEDGLIVEADEVLRLKVGVAGQPP--- 262
                ..|::||..|.....:.:.|:           |...||......:|  .::..|..||   
Mouse   726 ----GPELECTVGNLLPGTVYRFRV-----------RALNDGGYGPYSDV--SEITTAAGPPGQC 773

  Fly   263 --PAITWLHEGEVI-------APGG-----RFEVSNTEK---------NSLLKIDNVLREDRGEY 304
              |.:::..:|.|:       :||.     |.|....|:         ::..::.::|...:...
Mouse   774 RAPRVSFTPDGCVLVGWESPASPGADISEYRLEWGEDEQSLELVYHGPDTCFEMRDLLPAAQYCC 838

  Fly   305 MVKAWNRLGEDSTSFLV---TVTARPNP---------------PGTPKLNMSFGKSATLSWTAPL 351
            .::|:|..|....|.||   |..:.|:|               |.:|.:.:      .|:|..| 
Mouse   839 RLQAFNPAGAGPYSELVHCQTPASAPDPVSTLCVLEEEPPSAHPDSPSVCL------VLNWEEP- 896

  Fly   352 DDGGCKIGNYIVEYFRVGWNVWLKAATTRALSTTLH---DLIEGSEYKFRVKAENPYGLSEPSGE 413
                |..|:.|:.|     |:.|..:.....:||.|   :|:..:.|:.|::|.|..|:. |..:
Mouse   897 ----CNNGSEILAY-----NIDLGDSCITVGNTTTHVMKNLLPETTYRIRIQAINEIGVG-PFSQ 951

  Fly   414 SELLFI--------PDPKR---GITKPKSATRIAGDEKDKPKTGAGG-----MQVPPRRKTLSPP 462
                ||        |.|.|   ..:.|:|.....||...  ||.|.|     :|:..|.|..   
Mouse   952 ----FIKAKTRPLPPSPPRLECAASGPQSLKLKWGDSNS--KTHAAGDMVYTLQLEDRNKRF--- 1007

  Fly   463 RPQADASTGMSPKQSPSAKRKPKPQLIDNEQLTHEMSYGTSDHALKMDVRKSPSLNSADSANKPT 527
                     :|..:.||...|.       ::||....|.....|:            :::...|.
Mouse  1008 ---------ISIYRGPSHTYKV-------QRLTEFTCYSFRIQAM------------SEAGEGPY 1044

  Fly   528 TDSSNPKLNLTLVTTTLAPLDKSVPSPKAPR 558
            :::      .|..||...|     |:.||||
Mouse  1045 SET------YTFSTTKSVP-----PTLKAPR 1064

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14964NP_647779.2 FN3 29..127 CDD:238020 28/107 (26%)
I-set 138..227 CDD:254352 20/97 (21%)
Ig 155..224 CDD:143165 18/77 (23%)
IG_like 243..323 CDD:214653 19/108 (18%)
Ig 250..323 CDD:299845 19/101 (19%)
FN3 327..411 CDD:238020 22/101 (22%)
Fndc3bNP_001343882.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..213
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..265
FN3 283..377 CDD:238020
FN3 382..473 CDD:238020
FN3 481..570 CDD:238020
FN3 575..669 CDD:238020 28/107 (26%)
FN3 691..765 CDD:238020 19/95 (20%)
FN3 770..859 CDD:238020 16/88 (18%)
fn3 878..950 CDD:394996 21/88 (24%)
FN3 973..1052 CDD:238020 21/117 (18%)
FN3 1057..1130 CDD:238020 6/13 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0613
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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