DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14964 and mybpc3

DIOPT Version :9

Sequence 1:NP_647779.2 Gene:CG14964 / 38384 FlyBaseID:FBgn0035410 Length:1443 Species:Drosophila melanogaster
Sequence 2:XP_021333213.1 Gene:mybpc3 / 556489 ZFINID:ZDB-GENE-070112-2362 Length:1302 Species:Danio rerio


Alignment Length:564 Identity:142/564 - (25%)
Similarity:226/564 - (40%) Gaps:68/564 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GRPKKNVHWKSAERPSPPGRPILTPVALPEQQPDVVNLRWDRPLHDGGSPITGYTVEHRRMGSPH 79
            |....:::.|..:.|.||..|.:..|.     .|...::||.|..|||.|:.||.:|.::..|..
Zfish   778 GEDTADINVKVVDVPDPPEAPRILSVG-----EDSCVVQWDAPRFDGGQPVIGYVLERKKKKSYR 837

  Fly    80 WVRATPTPVDRCDVCISGLEPGWRYQFRCFAENIVGRSDASELSDPLTVTLQRNAITVPRFIDEL 144
            |:|....|..........:..|..|:.|.:|.|.:|.|..|..|.|. |.:...:..:...:|::
Zfish   838 WMRLNFDPYKETTFEAKKMIEGVPYEMRVYAVNAIGMSRPSAASQPF-VPVAPTSEPIGLCVDDI 901

  Fly   145 VDTNAVEDERIEFRVRILGEPPPE---INWFKDGYE----IFS--SRRTKIVNDNEASVLVIHQV 200
            .||......|...|:   |....|   :.:.|:|.:    .||  :.||.:         :|..:
Zfish   902 SDTTISLKWRTPERI---GSAELEGYGVEYCKEGSDEWIPAFSGLTERTSV---------IIRDL 954

  Fly   201 ALTDEGEIKCTATNRAG--------HVITKARLMVQAPPKIRLPRTYEDGLIVEADEVLRLKVGV 257
            ...::.:.:..|.|.||        ..:|...:|.:  |||.|||.....||.:..|.:.|.:..
Zfish   955 PTGEKMQFRVRAYNMAGPSAPATLQQAVTIREIMQR--PKIWLPRNLRQTLIKKVGETINLVIPF 1017

  Fly   258 AGQPPPAITWLHEGEVIAPGGRFEVSNTEKNSLLKIDNVLREDRGEYMVKAWNRLGEDSTSFLVT 322
            .|:|.|.::|....|.:.|.. ..:.|::.:::|.|....|:|.|:|.|:......||..|..:.
Zfish  1018 QGKPRPQVSWTKNDEPLDPKS-VSIRNSDTDTILFIRRSERKDSGKYDVQVQIENVEDKASVNIQ 1081

  Fly   323 VTARPNPPGTPKLNMSFGKSATLSWTAPLDDGGCKIGNYIVEYFRVGWNVWLKA-ATTRALSTTL 386
            :...|.||...|:...:|.:..|.|..|.|:|.|.|..|.::........|... ...|..:..:
Zfish  1082 IVDVPGPPQNLKVMDVWGFNVALEWKPPKDNGNCDITGYNIQKADKKTMEWYTVFEQYRRTNCVV 1146

  Fly   387 HDLIEGSEYKFRVKAENPYGLS-EPSGESELLFIPDPKRGIT-KPKSATRIAGDEKDKPKTGAGG 449
            .|||.|:||.|||.|.|..||| ||....:..:|  .|.||. ||.|..  ..|..:.||     
Zfish  1147 SDLIMGNEYVFRVYAANMVGLSPEPCLSKDSAYI--QKTGIVYKPPSYK--DHDFSEAPK----- 1202

  Fly   450 MQVPPRRKTLSPPRPQADASTGMSPKQSPSAKRKPKPQLI---DNEQLTHEMSYG--TSDHALKM 509
                     .:.|........|.:...|.|.:..|||::.   :...:|:|..|.  ::...|.:
Zfish  1203 ---------FTHPLKSRSVIAGYNATLSCSVRGIPKPKITWYKNKMDITNEAKYRMFSNQGVLTL 1258

  Fly   510 DVRKSPSLNSADSANKPTTDSSNP----KLNLTLVTTTLAPLDK 549
            ::||....:......|...||...    ||.:.|...|...:.|
Zfish  1259 EIRKPCPFDGGVYMCKAVNDSGEDLVECKLEVRLPQVTKEDIKK 1302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14964NP_647779.2 FN3 29..127 CDD:238020 30/97 (31%)
I-set 138..227 CDD:254352 19/105 (18%)
Ig 155..224 CDD:143165 15/85 (18%)
IG_like 243..323 CDD:214653 21/79 (27%)
Ig 250..323 CDD:299845 18/72 (25%)
FN3 327..411 CDD:238020 30/85 (35%)
mybpc3XP_021333213.1 I-set 12..94 CDD:333254
IG_like 177..272 CDD:214653
I-set 390..474 CDD:333254
I-set 481..565 CDD:333254
I-set 578..642 CDD:333254
Ig 681..788 CDD:325142 1/9 (11%)
FN3 792..878 CDD:238020 27/90 (30%)
FN3 891..983 CDD:238020 18/103 (17%)
Ig_Titin_like 1010..1082 CDD:319305 18/72 (25%)
FN3 1086..1169 CDD:238020 28/82 (34%)
I-set 1201..1290 CDD:254352 20/102 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000709
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X825
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.