DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32278 and Trmt5

DIOPT Version :10

Sequence 1:NP_728822.1 Gene:CG32278 / 38382 FlyBaseID:FBgn0052278 Length:111 Species:Drosophila melanogaster
Sequence 2:NP_001383002.1 Gene:Trmt5 / 362754 RGDID:1306567 Length:500 Species:Rattus norvegicus


Alignment Length:93 Identity:20/93 - (21%)
Similarity:38/93 - (40%) Gaps:28/93 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PKEVQGKLK----QIKESV-----KAKQEKLDASLKTLHK--------DLVVKKPK------APV 86
            |.:|:|..|    ..|::|     ||::|.:...::.|.:        ..|::.||      ..:
  Rat    68 PSDVRGMTKLDRTAFKKTVPIPVLKARKEVVSRLMRALRRVALQRPGIKRVIEDPKDEDSRLIML 132

  Fly    87 APIK-----SYKKKGVDAQKVSDTLSKL 109
            .|.:     |::|..:.|.|..|...:|
  Rat   133 DPYRMLTSDSFEKPELSALKELDVNPQL 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32278NP_728822.1 None
Trmt5NP_001383002.1 Met_10 191..411 CDD:396850
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.