DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Asciz and zfp-2

DIOPT Version :9

Sequence 1:NP_001261357.1 Gene:Asciz / 38381 FlyBaseID:FBgn0035407 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_496055.1 Gene:zfp-2 / 174505 WormBaseID:WBGene00009448 Length:422 Species:Caenorhabditis elegans


Alignment Length:205 Identity:47/205 - (22%)
Similarity:70/205 - (34%) Gaps:74/205 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 HRCERCPSLVFGNLSHYQLHLRRRHQEVIPPSVIGPIVAFHC---------------------PV 62
            :||..|.: .|||...||.|::..|.:.      .|...|:|                     |:
 Worm   171 YRCTNCKT-YFGNKEVYQRHIQEVHGDA------RPFRCFNCGMRFANKTSMTHHLKDHSLLKPM 228

  Fly    63 EKCIYHVATKGARSFTSLRLLRQHYQKSHLDKNYKCLACGGKFLLQHHLEKHQCSKHKC------ 121
            ..|.|     ..|.|:.|....:|: |.|..:: .|..|...|..:..|..||.:.|..      
 Worm   229 FSCDY-----CPRIFSKLESKTRHH-KMHFTRS-TCQTCMRFFTTEDALRHHQSTAHPATFDSGP 286

  Fly   122 PVCELTYNSKA--------GLRTHMRRKNHLVHHESDKVPIPSLATWKRLNPQPIPVS------- 171
            |..:|..|.|:        .||.|. :|:.|||              :|::....|.|       
 Worm   287 PPEDLLPNGKSARYSCSYCNLRFHF-KKDMLVH--------------ERIHTGEKPYSCGYCMKS 336

  Fly   172 ---ADSLTAH 178
               :.:||||
 Worm   337 FAQSQALTAH 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AscizNP_001261357.1 C2H2 Zn finger 98..117 CDD:275368 6/18 (33%)
zf-C2H2_2 <116..>143 CDD:289522 9/40 (23%)
C2H2 Zn finger 121..139 CDD:275368 7/31 (23%)
zfp-2NP_496055.1 C2H2 Zn finger 173..194 CDD:275368 8/21 (38%)
C2H2 Zn finger 202..222 CDD:275368 2/19 (11%)
C2H2 Zn finger 231..251 CDD:275368 7/25 (28%)
COG5048 <251..>358 CDD:227381 26/112 (23%)
C2H2 Zn finger 257..278 CDD:275368 6/20 (30%)
C2H2 Zn finger 302..322 CDD:275368 8/34 (24%)
C2H2 Zn finger 330..350 CDD:275368 4/17 (24%)
C2H2 Zn finger 358..374 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.