DRSC/TRiP Functional Genomics Resources

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Protein Alignment Asciz and atmin

DIOPT Version :9

Sequence 1:NP_001261357.1 Gene:Asciz / 38381 FlyBaseID:FBgn0035407 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_002938191.1 Gene:atmin / 100487308 XenbaseID:XB-GENE-5861068 Length:763 Species:Xenopus tropicalis


Alignment Length:484 Identity:98/484 - (20%)
Similarity:171/484 - (35%) Gaps:132/484 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HSEKHTPDIRELMPVREHR---------CERCPSLVFGNLSHYQLHLRRRHQEVIPPSVIGPIV- 56
            |.|...|.:.||  .||.|         |.:    |..|.....:||.:.|:  |...|:.|.: 
 Frog    21 HWEIVKPSVSEL--TREVRNNILCTVTGCGK----VLPNPPALNMHLVKSHR--IQDGVLNPTLR 77

  Fly    57 --------AFHCPVEKCIYHVATKGA-RSFTSLRLLRQHYQKSHLDKNYKCLACGGKFLLQHHLE 112
                    .:.||:|.|     .:|. |.|:....::||:.|.|.:|.:||:.||..:..:..|:
 Frog    78 KDLKASQKLYCCPIEGC-----PRGTNRPFSQFSRVKQHFMKMHAEKKHKCIQCGSSYGTEWDLK 137

  Fly   113 KH--QCSKHKCPVCELTYNSKAGLRTHMRRKNHLVHHESDKVPIP---------SLATWK--RLN 164
            :|  .|.|.....|...|.|:..|.:|:.|..|.:..|..:.|:.         ||.|..  ||.
 Frog   138 RHLGYCGKTFHCTCGCPYASRTALLSHINRTGHEIPVEHREPPVKKKKIEAAMRSLETMNEARLP 202

  Fly   165 PQPIPVSA-------------DSLTAHSLKTGSDLHPSEEYINNLPS------NLAGVTELYAEI 210
            ...:|:::             :||::..|...:...|.:.....||.      .:...|.|...:
 Frog   203 ESDLPLASQDDQMADLKLCTVESLSSSCLTESNPSQPKQTQKLLLPKLALLKLPVMQFTHLPVLV 267

  Fly   211 PNPEANMPSTLELDTNLPAAEEHIL-----CFLPIMDVSYALEMSSQKLDMETQTEEDDLNEIRN 270
            |:...::...|....:..|....||     ..:..:|.:.||...   :.:...|:.:.:..:.:
 Frog   268 PSSACSVKPVLVAVKDSVATSVQILSNYNGSIVSNLDTNTALPAG---IVLSRNTDSNTVGPVNS 329

  Fly   271 EVLAPLLRDIETQ--------------TPDTRGDIGTMTDD-FPEEQEPVAVGSHFHAYSETEPM 320
            .|...|.:.:.:.              |.|.:.||...|.. .|:  .|....|...:.|:|:..
 Frog   330 FVQVNLDKPVSSNIMSDMGNISQKNRITSDVQTDISYFTQSLLPD--PPWTSDSCVSSCSQTDLS 392

  Fly   321 FDLQTSAHMYTQTCDDLFEELGLSHIQTQTHWPDGLYNT---------------QHTQTCDEI-- 368
            |:.|.|..:..:|          ..:|:.:..|   |:|               :.|||..|:  
 Frog   393 FNAQISLPISVET----------QTLQSNSELP---YSTKAGMSISPCFSGGISRETQTNTELSR 444

  Fly   369 -----------MDELFP--DNFQSTCTQT 384
                       .:.:|.  .:|.:..|||
 Frog   445 GATLQVDQAVMCENIFTGGHSFYTVSTQT 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AscizNP_001261357.1 C2H2 Zn finger 98..117 CDD:275368 5/20 (25%)
zf-C2H2_2 <116..>143 CDD:289522 8/26 (31%)
C2H2 Zn finger 121..139 CDD:275368 5/17 (29%)
atminXP_002938191.1 C2H2 Zn finger 89..116 CDD:275368 10/31 (32%)
C2H2 Zn finger 123..140 CDD:275368 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006179
OrthoInspector 1 1.000 - - oto104413
Panther 1 1.100 - - LDO PTHR46664
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5759
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.130

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