DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15812 and klhl24

DIOPT Version :9

Sequence 1:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001072337.1 Gene:klhl24 / 779790 XenbaseID:XB-GENE-1000313 Length:600 Species:Xenopus tropicalis


Alignment Length:217 Identity:45/217 - (20%)
Similarity:77/217 - (35%) Gaps:52/217 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HSSTIMDIQRSLRNDNQHCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATIMLPDI 73
            ||.:|:.:....|.:....:|::.. :|.....|..:||.||...|.:..:..|  |:..||.:|
 Frog    48 HSESILQVFNEFRENRLFTDVIICV-EGREFPCHRAILSACSSYFRAMFCNDHR--ESREMLVEI 109

  Fly    74 RG---DLLECMLSFIYMGETSLPSAS-----------------------LPEFLEAINLLGIK-- 110
            .|   :.::|.|.::|.|...:.:.:                       |.|.|:..|.|||:  
 Frog   110 NGIFAEAMDCFLQYVYTGRVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQHF 174

  Fly   111 ------SAISFECNPSASPPSVDVENHSLAVESAKSITGLQIAEAELLDDEEEPHPMVSVPATTL 169
                  ..:..:|...|.....||..|.         ..|::.:|||:|.......:||......
 Frog   175 ADTHSLKTLFTKCKSFAQQAFEDVVQHE---------EFLELGKAELIDYVSTDELVVSKEELVF 230

  Fly   170 AGSQHQPSHSSRSLEYIDVYEP 191
            ........|      ::||..|
 Frog   231 EAVMRWVYH------HVDVRRP 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15812NP_523897.2 BTB 20..113 CDD:279045 26/126 (21%)
BTB 35..118 CDD:197585 24/116 (21%)
HTH_psq 348..392 CDD:283007
HTH_psq 458..501 CDD:283007
klhl24NP_001072337.1 BTB_POZ_KLHL24_KRIP6 48..168 CDD:349562 25/122 (20%)
PHA03098 59..566 CDD:222983 42/206 (20%)
KELCH repeat 354..393 CDD:276965
KELCH repeat 397..441 CDD:276965
KELCH repeat 444..489 CDD:276965
KELCH repeat 492..529 CDD:276965
KELCH repeat 536..578 CDD:276965
Kelch 545..591 CDD:128874
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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