DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15812 and mod(mdg4)

DIOPT Version :9

Sequence 1:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster


Alignment Length:501 Identity:107/501 - (21%)
Similarity:185/501 - (36%) Gaps:134/501 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATIMLPDIRGDLLECMLSFIYMGETSL 92
            :|.||: :|..|:||..|||.||...|.:...:|....|.:.|.::....|:.::.|:|.||.::
  Fly    33 DVSLAA-EGQIVKAHRLVLSVCSPFFRKMFTQMPSNTHAIVFLNNVSHSALKDLIQFMYCGEVNV 96

  Fly    93 PSASLPEFLEAINLLGIKSAISFECNP-----SASPPSV-DVENHSLAVE-------SAKSITGL 144
            ...:||.|:.....|.||.....:..|     |:.||:. .|:...:..:       .|.:...:
  Fly    97 KQDALPAFISTAESLQIKGLTDNDPAPQPPQESSPPPAAPHVQQQQIPAQRVQRQQPRASARYKI 161

  Fly   145 QIAEAELLDDEEEPHPMV----SVPATTLAGSQHQPSHSSRSLEYIDVYEPPKITYSIEHMDGSS 205
            :..:..|.|:::....:|    :.|..|:. .|.||..:::.::                     
  Fly   162 ETVDDGLGDEKQSTTQIVIQTTAAPQATIV-QQQQPQQAAQQIQ--------------------- 204

  Fly   206 SGNQFILTENTGTFTITQS------------ASSLSKIEADETGTSGAEVDLGDDD--------- 249
              :|.:.|..|.|.|:..:            |||.:.::..:|.||...:|..|..         
  Fly   205 --SQQLQTGTTTTATLVSTNKRSAQRSSLTPASSSAGVKRSKTSTSANVMDPLDSTTETGATTTA 267

  Fly   250 -------------VDADLAEDSEEHESQMIDEEFAQADPLMELEAGTEMD--------------- 286
                         |.|..|:..::...|:..||....|..|||...:|.|               
  Fly   268 QLVPQQITVQTSVVSAAEAKLHQQSPQQVRQEEAEYIDLPMELPTKSEPDYSEDHGDAAGDAEGT 332

  Fly   287 --DDDDVHDQLVDE----EIDDKPRKL-----GGGKTRIRRPISAKAVKRLSDCKPTRIQQFAAL 340
              :||...|...|:    |.:|...:.     |||.|    ..::|||.:      .:.|.::. 
  Fly   333 YVEDDTYGDMRYDDSYFTENEDAGNQTAANTSGGGVT----ATTSKAVVK------QQSQNYSE- 386

  Fly   341 KREVKDDINDALDLAADAVIIEGLSLQKAADRFDISKTVLWRRVRTNP-AYMRNNRERPSLQEAY 404
                    :..:|.:.|    :|.:..:||.  ..|.|.:..|.|..| ..:.:...:|.|.|..
  Fly   387 --------SSFVDTSGD----QGNTEAQAAT--SASATKIPPRKRGRPKTKVEDQTPKPKLLEKL 437

  Fly   405 ERLKNGHSLKSISSELQIPMSTLHRHKVRLSAQGRLPNFVSCRKRD 450
            :    ..:|...:||..:..||. :..|:|...|.|..| |.||.|
  Fly   438 Q----AATLNEEASEPAVYASTT-KGGVKLIFNGHLFKF-SFRKAD 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15812NP_523897.2 BTB 20..113 CDD:279045 27/84 (32%)
BTB 35..118 CDD:197585 24/82 (29%)
HTH_psq 348..392 CDD:283007 10/44 (23%)
HTH_psq 458..501 CDD:283007
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 27/85 (32%)
BTB 33..118 CDD:197585 27/85 (32%)
FLYWCH 452..512 CDD:282369 11/28 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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