DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15812 and ttk

DIOPT Version :9

Sequence 1:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001189329.1 Gene:ttk / 48317 FlyBaseID:FBgn0003870 Length:813 Species:Drosophila melanogaster


Alignment Length:515 Identity:103/515 - (20%)
Similarity:182/515 - (35%) Gaps:136/515 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKWMGHSSTIMDIQRSLRNDNQHCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEATI 68
            |:|..|.|.::.:...|.:.....:|.||. :|..::||..|||.||.....|.|..|. :...:
  Fly    10 LRWNNHQSNLLSVFDQLLHAETFTDVTLAV-EGQHLKAHKMVLSACSPYFNTLFVSHPE-KHPIV 72

  Fly    69 MLPDIRGDLLECMLSFIYMGETSLPSASLPEFLEAINLLGIKSAISFECNPSASPPSVDVENHSL 133
            :|.|:....::.:|.|:|.||.|:....|..||.....|.||                       
  Fly    73 ILKDVPYSDMKSLLDFMYRGEVSVDQERLTAFLRVAESLRIK----------------------- 114

  Fly   134 AVESAKSITGLQIAEAELLDDEEEPHPMVSVPATTLAGSQHQPSHSSRSLEYIDVYEPPKITYSI 198
                     ||    .|:.||:..       ||...||:....|.|:.:...:...:|    |.:
  Fly   115 ---------GL----TEVNDDKPS-------PAAAAAGAGATGSESTATTPQLQRIQP----YLV 155

  Fly   199 EHMDGSSSGNQFILTENTG-TFTITQSASSLS-------------KIEADETGTSGAEVDLGDDD 249
            ...:.|.:|.......|.| |.|:....|.||             |:.....||..   |..|.|
  Fly   156 PQRNRSQAGGLLASAANAGNTPTLPVQPSLLSSALMPKRKRGRPRKLSGSSNGTGN---DYDDFD 217

  Fly   250 VDADLAEDSEEHESQMIDEEFAQADPLMELEAGTEMDDDDDVHDQLVDEEIDDKPRKLGGGKTRI 314
            .:..:.:.|:....:|.:|.::..|.      |::.:..:..|...::|..|..|.|      |.
  Fly   218 RENMMNDSSDLGNGKMCNESYSGNDD------GSDDNQPNAGHTDDLNESRDSLPSK------RS 270

  Fly   315 RRPISAKAVKRLSD----CKPTRIQQFAALKREVKDDINDALDLAADAVI------------IEG 363
            :.....:.|....|    ..||:          ...:::..|..::...|            .|.
  Fly   271 KNSKDHRVVSHHEDNSTSVTPTK----------ATPELSQRLFGSSSTTISATAPGGSSTGPSET 325

  Fly   364 LSLQKAADRFDIS----KTVLWRRVR----TNPAYMRN----NRERPSLQEAYERLKNGHS---- 412
            :||.:.:|..:.:    .|:|..::|    |.||...:    .:.:|.:::| ....|.:|    
  Fly   326 ISLLEISDERESAPVHLPTILGLKIRAINTTTPAQQGSPQTPTKSKPKIRQA-TGSNNSNSLLKQ 389

  Fly   413 -LKSISSELQIPMSTLHRHKVRLSAQGRLPNFVSCRKRDNTPKD--ELRDKLAKAVHACL 469
             |:..:.:.::|.:|            |:...|:.....|..:.  |:..|....|:||:
  Fly   390 QLRGGAKDPEVPPAT------------RITGAVTPNAALNAEEQSKEMPKKNQDEVNACI 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15812NP_523897.2 BTB 20..113 CDD:279045 29/92 (32%)
BTB 35..118 CDD:197585 25/82 (30%)
HTH_psq 348..392 CDD:283007 12/63 (19%)
HTH_psq 458..501 CDD:283007 4/12 (33%)
ttkNP_001189329.1 BTB 23..119 CDD:279045 31/133 (23%)
BTB 34..119 CDD:197585 30/122 (25%)
C2H2 Zn finger 612..638 CDD:275370
zf-C2H2_4 646..669 CDD:290605
C2H2 Zn finger 648..669 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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