DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15812 and klhl20

DIOPT Version :9

Sequence 1:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster
Sequence 2:XP_005163549.1 Gene:klhl20 / 406274 ZFINID:ZDB-GENE-040426-1935 Length:591 Species:Danio rerio


Alignment Length:437 Identity:78/437 - (17%)
Similarity:152/437 - (34%) Gaps:158/437 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HSSTIMDIQRSLRNDNQHCEVVLASRDGVRVRAHLFVLSTCSELMRNLLV-DVPRGQEATIMLPD 72
            |....:::...||...:.|:|||.. ...::.||..:||.||...|.:.. ::...::..:::.|
Zfish    32 HPRQTLEVINLLRKHRELCDVVLVV-GAKKIYAHRVILSACSPYFRAMFTGELAESRQTEVVIRD 95

  Fly    73 IRGDLLECMLSFIYMG---------ETSLPSASLPEF--------------LEAINLLGIKSAIS 114
            |....:|.::.|.|..         :|.||:|.|.:.              |:..|.|||::.  
Zfish    96 IDERAMELLIDFAYTSQVTVEEGNVQTLLPAACLLQLAEIQEACCEFLKRQLDPSNCLGIRAF-- 158

  Fly   115 FECNPSASPPSVDVENHSLAVESAKSITGLQIAE-------AELLDDEEEPHPMVSVPATTLAGS 172
                         .:.|     |.:.:  |:||:       .|:::.||    .:.:||..|...
Zfish   159 -------------ADTH-----SCREL--LRIADKFTQHNFQEVMESEE----FMLLPANQLIDI 199

  Fly   173 QHQPSHSSRSLEYI----------DVYE-PPKITYSIEHMDGSSSGNQFILTENTGTFTITQSAS 226
            ......:.||.|.:          .:.| .|::...::|:.......:|::              
Zfish   200 ISSDELNVRSEEQVFNAVMAWVKYSIQERRPQLPQVLQHVRLPLLSPKFLV-------------- 250

  Fly   227 SLSKIEADETGTSGAEVDLGDDDVDADLAEDSEEHESQMIDEEFAQADPLMELEAGTEMDDDDDV 291
                      ||.|::..:..|:...||.::::.:  .::.:|    .|||:             
Zfish   251 ----------GTVGSDPLIKSDEECRDLVDEAKNY--LLLPQE----RPLMQ------------- 286

  Fly   292 HDQLVDEEIDDKPRKLGGGKTRIRRPI-------------SAKAVKRLS--DCKPTRIQQFAALK 341
                             |.:||.|:||             |..|:..:.  |.:....:..|::.
Zfish   287 -----------------GPRTRPRKPIRCGEVLFAVGGWCSGDAISSVERYDPQTNEWRMVASMS 334

  Fly   342 R-------EVKDDINDALDLAADAVIIEGLSLQKAADRFDISKTVLW 381
            :       .|.||:..|:...      :|.|...:.:|:| .||..|
Zfish   335 KRRCGVGVSVLDDLLYAVGGH------DGSSYLNSVERYD-PKTNQW 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15812NP_523897.2 BTB 20..113 CDD:279045 28/116 (24%)
BTB 35..118 CDD:197585 22/106 (21%)
HTH_psq 348..392 CDD:283007 8/34 (24%)
HTH_psq 458..501 CDD:283007
klhl20XP_005163549.1 BTB 41..144 CDD:279045 23/103 (22%)
PHA03098 45..568 CDD:222983 75/424 (18%)
BACK 152..253 CDD:285009 22/150 (15%)
Kelch 301..347 CDD:128874 5/45 (11%)
KELCH repeat 337..381 CDD:276965 11/45 (24%)
Kelch 348..395 CDD:128874 8/34 (24%)
KELCH repeat 385..429 CDD:276965
Kelch 397..442 CDD:128874
KELCH repeat 432..477 CDD:276965
Kelch 444..489 CDD:128874
KELCH repeat 479..522 CDD:276965
Kelch 491..536 CDD:128874
KELCH repeat 526..571 CDD:276965
Kelch 537..581 CDD:128874
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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