DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15812 and klhl7

DIOPT Version :9

Sequence 1:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_957171.1 Gene:klhl7 / 393851 ZFINID:ZDB-GENE-130212-1 Length:538 Species:Danio rerio


Alignment Length:133 Identity:36/133 - (27%)
Similarity:56/133 - (42%) Gaps:31/133 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 STIMDIQRSLRNDNQHCEVVLASRDGVRVRAHLFVLSTCSELMRNLLVDVPRGQEAT---IMLPD 72
            |.||.:..:||.....|:|:|.. :|..:.||..|||..|....  |:......||:   :.|..
Zfish    30 SNIMGVMNNLRKQGILCDVILVV-EGKHILAHRVVLSAASHFFS--LMFTSSMMEASNHEVELGG 91

  Fly    73 IRGDLLECMLSFIYMGETSLPSAS-----------------------LPEFLEAINLLGIKSAIS 114
            ...:::|.::.|||....|:.|.:                       |.|.::|.|.||| ||::
Zfish    92 AEPEIIELLVEFIYTARISVNSNNVQSLLNAANQYQIDPVKKMCVDFLKEQVDATNCLGI-SALA 155

  Fly   115 FEC 117
             ||
Zfish   156 -EC 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15812NP_523897.2 BTB 20..113 CDD:279045 30/118 (25%)
BTB 35..118 CDD:197585 28/109 (26%)
HTH_psq 348..392 CDD:283007
HTH_psq 458..501 CDD:283007
klhl7NP_957171.1 BTB 36..140 CDD:279045 22/106 (21%)
PHA03098 41..538 CDD:222983 31/122 (25%)
BACK 148..250 CDD:285009 7/12 (58%)
KELCH repeat 328..370 CDD:276965
KELCH repeat 374..418 CDD:276965
Kelch 385..432 CDD:128874
KELCH repeat 422..470 CDD:276965
Kelch 433..482 CDD:128874
Kelch_1 472..517 CDD:279660
KELCH repeat 473..517 CDD:276965
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.