DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15812 and Klhl20

DIOPT Version :9

Sequence 1:NP_523897.2 Gene:CG15812 / 38379 FlyBaseID:FBgn0035405 Length:518 Species:Drosophila melanogaster
Sequence 2:XP_008767871.1 Gene:Klhl20 / 304920 RGDID:1309490 Length:633 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15812NP_523897.2 BTB 20..113 CDD:279045
BTB 35..118 CDD:197585
HTH_psq 348..392 CDD:283007
HTH_psq 458..501 CDD:283007
Klhl20XP_008767871.1 BTB 83..186 CDD:279045
PHA03098 87..610 CDD:222983
BACK 194..295 CDD:285009
Kelch 343..389 CDD:128874
KELCH repeat 379..423 CDD:276965
Kelch 390..437 CDD:128874
KELCH repeat 427..471 CDD:276965
Kelch 439..484 CDD:128874
KELCH repeat 474..519 CDD:276965
Kelch 486..531 CDD:128874
KELCH repeat 521..564 CDD:276965
Kelch 533..578 CDD:128874
Kelch_1 567..612 CDD:279660
KELCH repeat 568..613 CDD:276965
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.