DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-30 and Ndufs3

DIOPT Version :9

Sequence 1:NP_647775.1 Gene:ND-30 / 38378 FlyBaseID:FBgn0266582 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_080964.1 Gene:Ndufs3 / 68349 MGIID:1915599 Length:263 Species:Mus musculus


Alignment Length:266 Identity:164/266 - (61%)
Similarity:192/266 - (72%) Gaps:8/266 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAALIRNLGARAAVAALSAKHVVPAAGSTALRMASTTPVEPKKADK-PTVRQPDAVARSHLSDFG 64
            |||....:..|..:.|.|   |...||..:: :......|...||| ||||....|....||.||
Mouse     1 MAAAAARVWCRGLLGAAS---VGRGAGRPSV-LWQHVRRESAAADKRPTVRPRSDVTHKQLSAFG 61

  Fly    65 RYVAECLPKYVQKVQLTAGDELEVLIAPEGVVPVLQFLKDHHQAQFTNLVDIAGVDVPCRKNRFE 129
            .||||.||||||:||::..||||:.|.|:||:|.|.||:||..|||.:|.|:..||||.|:||||
Mouse    62 EYVAEILPKYVQQVQVSCLDELEICIHPDGVIPTLTFLRDHTNAQFKSLADLTAVDVPTRQNRFE 126

  Fly   130 VVYNLLSLRYNSRIRVKTYTDELTPLDSACEVHKAANWYEREIWDMYGVFFANHPDLRRILTDYG 194
            :||||||||:|||||||||.|||||:||...||.||||||||:|||:||||.|||||||||||||
Mouse   127 IVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHIAANWYEREVWDMFGVFFFNHPDLRRILTDYG 191

  Fly   195 FEGHPQRRDFPLSGYVELRYDDEKKRVVCEPLELAQEFRKFDLSAPWEQFPNFRNANPPAEVVPP 259
            |||||.|:||||:||||||||||.||||.||:|||||||||||::|||.||.:|.   |.|.:..
Mouse   192 FEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPAYRQ---PPESLKL 253

  Fly   260 QAPAKK 265
            :|..||
Mouse   254 EAGDKK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-30NP_647775.1 PRK06074 60..242 CDD:235691 136/181 (75%)
Ndufs3NP_080964.1 PRK06074 57..239 CDD:235691 136/181 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850507
Domainoid 1 1.000 201 1.000 Domainoid score I3015
eggNOG 1 0.900 - - E1_COG0852
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3346
Inparanoid 1 1.050 315 1.000 Inparanoid score I2542
Isobase 1 0.950 - 0.906565 Normalized mean entropy S2902
OMA 1 1.010 - - QHG51846
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005716
OrthoInspector 1 1.000 - - oto94614
orthoMCL 1 0.900 - - OOG6_101398
Panther 1 1.100 - - LDO PTHR10884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3435
SonicParanoid 1 1.000 - - X4118
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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