DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BtbVII and lola

DIOPT Version :10

Sequence 1:NP_647774.2 Gene:BtbVII / 38376 FlyBaseID:FBgn0263108 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster


Alignment Length:1029 Identity:234/1029 - (22%)
Similarity:357/1029 - (34%) Gaps:296/1029 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHP 68
            |||||||||||...|||..:||.|.||||.||||||:.|:|||:||||||.||..|......:||
  Fly     5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHP 69

  Fly    69 IVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSST 133
            |.|||||:|.:|:.|:|:||.||||:||:||..:||.||.|:||||::..|......|.:|....
  Fly    70 IFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPESSGHH 134

  Fly   134 DGTEMVGG--------AGVGT-GAGNSAGSLGAGSGSSVGDSLWSSSEAQQFQQQQQQQAQQQAQ 189
            .|.::.|.        |.:.| ||.:::|.:   |||..|    |||.:::.::.:::..:..|.
  Fly   135 RGGKLSGAYTLEQTKRARLATGGAMDTSGDV---SGSREG----SSSPSRRRRKVRRRSMENDAH 192

  Fly   190 QQHHHHQQQ-----QQLQQQ-----------------------QQQAQQQQQQQQHHHHHHQQQ- 225
            ...:....|     |.:.||                       ..||...||||.....:..:: 
  Fly   193 DNSNSSVLQAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTSTNVTKKT 257

  Fly   226 ---------------QSGQAQAAQTHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGS----GDR 271
                           .|..|...|.|.||.:      :..||.|...:.::..|..|:    || 
  Fly   258 ESAKLTSSTAAPASGASASAAVQQAHLHQQQ------AQTTSDAINTENVQAQSQGGAQGVQGD- 315

  Fly   272 NNAEEQHNSSLDAGSGAGNAGLSLAQMNQMTFGAGGGLAGHSLHAAKLLKESAS----------- 325
                   :..:|.||..|..       |..|.......:..::||..::|:.||           
  Fly   316 -------DEDIDEGSAVGGP-------NSATGPNPASASASAVHAGVVVKQLASVVDKSSSNHKH 366

  Fly   326 -----------AELEQQPQDSDLDDGHGHLHMQIKPEVDIGGVNQTM-PLDISGGTTPS------ 372
                       :|:..:|:....||.|.    :...::.:...:.|| .||.:.||:..      
  Fly   367 KIKDNSVSSVGSEMVIEPKAEYDDDAHD----ENVEDLTLDEEDMTMEELDQTAGTSQGGEGSSQ 427

  Fly   373 -----EHDAPNSQSSHSE----PSPAHAPHPPHPPLGAASSSSGGSGSFERSFSIGGVGSVEC-- 426
                 :||     .|..|    ...|....|..........:.|....||..         :|  
  Fly   428 TYATWQHD-----RSQDELGLMAQDAQQRDPQASKQDKGEQTEGAQDEFELD---------DCLL 478

  Fly   427 ---------DPDGTPSSPAVMGT------KRNRVLTRQ----------------PRVKRDSDSIS 460
                     :.||.......:|.      :.|:.:.:|                |.:....::.:
  Fly   479 ESNDIVITQNKDGFVLHVKKLGNITAAKLEENQAVAQQQGQAAVTVTGPAGQPTPTITELLNAAA 543

  Fly   461 STNQISPDTAATTLDFDP----------FNAAGATSATARDYSTTGSHHLHHQSAVHHHHHLL-- 513
            :::. .|....|||...|          .|......||    :|..:||.|..|.:.|.||::  
  Fly   544 ASHS-EPKPTLTTLTSTPIKLPSSECELINIKKIIPAT----TTIATHHPHTSSTIIHPHHIIQH 603

  Fly   514 -TVPPRIERHASEPAPSLAPSTPHLLSVP-SSTPYLIKQHS------DPLLPRQSALHMAGSGS- 569
             :..|..:.|..:      ..|.|:..|| :|..:..:||.      .|...:..::..|..|. 
  Fly   604 VSQEPHHQEHHQQ------HQTIHIEEVPQTSQQHHQQQHHHQLQTVQPTHTQVQSIITAHPGQT 662

  Fly   570 ----GSSSAMATGSNPFAPLHRQYSHPLSG---SNASYV-TPAPLHHPHH--------------- 611
                |..:.....|.|.|...|.....:.|   .|...| |..|:.|.||               
  Fly   663 INLVGLRNVQLADSKPIASRIRYSRGKIIGPTVQNLQIVETHEPIQHQHHELSDGTKYEISEIDL 727

  Fly   612 ---------------------ISLPESIYASGSPPPAGSSQYLVPTRVVACPVVSSETAATPTNA 655
                                 |.||:.........|:..::::..:        ..||..|....
  Fly   728 NNPNASAAIISDLVKYAEIDDIELPDGTKIGIGFAPSEITEHMQTS--------GGETHITTIEH 784

  Fly   656 SPGSSSTVSAAVSVVTSPNAGLQNSASRHPLSPTFSIGSDVAHERRSPHSPSISRSQVVERAGKN 720
            .|....||........:.:.......:.|..:...|......|:::..|     :...:|....:
  Fly   785 EPQELQTVHQHEQTQQTHHIHAGQLQTHHIQTVVQSSSGQQQHDQQQHH-----QHHSIELQDDD 844

  Fly   721 PAEAANGGGSRLRTSKSASGSITGTHLHPGQATMSSSFEHLPTLRVKNEELQRSVSSPQTQREII 785
            ..|                 :||...|  |....|.|:..|.|..:|.|    |...|......:
  Fly   845 GVE-----------------TITPEEL--GMHDSSKSYTILTTRPMKEE----SEHDPSGMTYEL 886

  Fly   786 TLENPRSSHCPVIRPGPALGCNFC-----W-NTIDGHGRI-LRRKTKYH-CPEC 831
            :|.:  ||..|...|.....|..|     | :|:..|..: ...|...| ||.|
  Fly   887 SLSD--SSLGPCDDPESRYVCRHCGKKYRWKSTLRRHENVECGGKEPCHPCPYC 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BtbVIINP_647774.2 BTB_POZ_BAB-like 30..113 CDD:349624 50/82 (61%)
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 50/82 (61%)
C2H2 Zn finger 905..925 CDD:275368 5/19 (26%)
zf-H2C2_5 935..957 CDD:404746 3/4 (75%)
C2H2 Zn finger 935..955 CDD:275368 3/4 (75%)

Return to query results.
Submit another query.