DRSC/TRiP Functional Genomics Resources

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Protein Alignment BtbVII and mamo

DIOPT Version :9

Sequence 1:NP_647774.2 Gene:BtbVII / 38376 FlyBaseID:FBgn0263108 Length:907 Species:Drosophila melanogaster
Sequence 2:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster


Alignment Length:1500 Identity:310/1500 - (20%)
Similarity:463/1500 - (30%) Gaps:688/1500 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTL-AAEGRQLQAHKIVLSACSSYFQALFTTNP 64
            |..:.:||||||:|.|.:.|.|.||.:|:|||||| .:||..::|||:||||||||||:||..:|
  Fly     1 MGSEHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEHP 65

  Fly    65 CQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDS 129
            ..|.|||||||::.:|:|:|:|||.|||||...||..:|||||.||:||||||...  |.|..:.
  Fly    66 EGHLIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGLAEMTNQ--NTTLREP 128

  Fly   130 KSSTDGTEMVGGAGVG------------------------------------------------- 145
            :...|.....||.|.|                                                 
  Fly   129 EREPDRLRPQGGGGSGGSAHKAADSPAAALDATAATQAATATATATAAAATSTSTSATSAAATAA 193

  Fly   146 ------------------------------------------------TGAGNSAGSLGAGSGSS 162
                                                            |.|..:|.:..:.||.:
  Fly   194 ATAATSASTTATAAAGSSNTTTTTAATTTATCATAATSTAATSSSSSVTSAAAAAAAAASASGVA 258

  Fly   163 VGDSLWSSS-------------------------------EAQQFQQQQQQQAQQ---------- 186
            ..:...|||                               :..:.::|:|.||.:          
  Fly   259 HSEEATSSSSSTGGQKREASDRSSPTPAKRSSRMHPADKVDVAEDREQEQNQADELLSEELLGRN 323

  Fly   187 --------------------------------------------------------QAQQQ---- 191
                                                                    .|.||    
  Fly   324 LKDEEDDDVDELDENEETKLRGRDEDDDDEDEEEDTPMPLDLYQRPNVEPKSAAAATAAQQGGSN 388

  Fly   192 ---------H------------------------------------------------------- 192
                     |                                                       
  Fly   389 SLSGSSNACHTNSSSNSNNNNNNNNNSSSNNNNNTSSGKTSASSNGGTASSGGTADSVVAVDDDD 453

  Fly   193 ------HHHQQQ---QQLQQQ-----------------------QQQAQQQQQQQQHHHHHHQQQ 225
                  ||||:|   .:|:|.                       .|:...|..|:.||.|||.|.
  Fly   454 DDDDGGHHHQRQVMDDRLEQDVDEEDLDDDVVVVGPATAMARGIAQRLAHQNLQRLHHTHHHAQH 518

  Fly   226 QSGQ-----AQAAQTHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGSGDRNNAEEQHNSSLDAG 285
            |..|     :|...|.|||...|.|. .....|...:..:.....:...|..:.:|..|||.|.|
  Fly   519 QHSQHHHPHSQHHHTPHHQQHHTHSD-DEDAMPVIAKSEILDDDYDDEMDLEDDDEADNSSNDLG 582

  Fly   286 ----SGAGNAGLSLAQMNQMTFGAGGGL---AGHSLHAAKLL---------KESASAELEQQPQD 334
                .|:|.|            |.|||:   .|.:|..:.|:         ..:|:|.:|.|...
  Fly   583 LNMKMGSGGA------------GGGGGVDLSTGSTLIPSPLITLPSSSAAAAAAAAAAMESQRST 635

  Fly   335 -------------SDLD--------------DGHGHLHMQIKPEVDIGGVN-------------- 358
                         |||.              ||.|:       :...||.:              
  Fly   636 PAMSAAQAAGAGASDLSIGGCGGRPASRSSRDGGGN-------DGGRGGASSSSLLSPGTVANLL 693

  Fly   359 --QTMPLDISGGTTPSEHDAPNSQSSHSEPSPAHAPHPPHPPLGAASSSSGGSGSFE-------- 413
              |::||.:......||.|    .||||.          |....:||:..|..|..:        
  Fly   694 PVQSVPLSLKKEIDCSEDD----NSSHSR----------HMQQRSASAGGGLGGDLDYRASHESL 744

  Fly   414 -RSFS--IGGVGSVEC-DPDGTPSSPAVMG----------------------------------- 439
             |:||  :..:.:..| .|...|.||..:.                                   
  Fly   745 LRNFSSPMSAMAASRCPTPFAFPFSPLGLSLFDIDPSRILSLLHHQTWLAEEALRTRGLLTAPKD 809

  Fly   440 -----TKRNRVLTR-------QPRV--KRDSDSISSTNQIS------------------PDTAAT 472
                 |..:.:||:       ||.|  ...:.:.|||:|:|                  |.|...
  Fly   810 FPHRFTTLSDLLTKDYQPGAGQPMVTATATATTASSTSQVSASRSGDTQYNKHAQQPQQPQTGGA 874

  Fly   473 T------LDFDPFNAAGATSATARDYSTTGSHHLHHQSAVHHHHHLLTVPPRIERHASEPAP-SL 530
            |      |...|  .||| |...|..:.|..:....|..              :...|.|:| .:
  Fly   875 TGSGVGGLGGSP--TAGA-SFNLRYPTPTAFYQQQQQQG--------------KGAKSSPSPQQM 922

  Fly   531 APSTPHLLS----------------------VPSS-TPYLIKQHSDPLLPRQSALH-MAGSGSGS 571
            |.|:..::|                      :||. :..|.|:..:.||.||.... :|||||||
  Fly   923 ATSSTTVMSNDSGEDSCKRSSADSDEVTIMELPSERSAQLYKESLEQLLQRQRRTPILAGSGSGS 987

  Fly   572 SSAMATGS--NPFAPLHRQYSHPL---SGSNASYVTPAPLHHPHHISLPESIYASGSPPPAGSSQ 631
            .|...:||  ...|.| |||:..|   :||..:          ..:....|..::.|.||..:.|
  Fly   988 GSGTGSGSVIVDAAGL-RQYTQLLLAGAGSGGA----------SDLKEKSSSSSTSSTPPLLTQQ 1041

  Fly   632 YLVPTRVVACPVVSSETAATPTNASPGSSSTVSAAVS----------VVTS---PNAGL--QNSA 681
            .   ::::..|   |:|.::..::|.|.:.:....::          ||.:   ||..|  |::|
  Fly  1042 L---SQMLKSP---SDTCSSLFSSSGGGTGSTGPGITGETIEEETRCVVCNAHFPNVWLLEQHAA 1100

  Fly   682 SRHP-LSP-------------TFSIGSDVAHERRSPHSPSISRSQV------------------- 713
            .:|| :.|             ::...|..|..:...|...:...::                   
  Fly  1101 LQHPHVGPGEEKPFICEQCGQSYRYRSAYAKHKEQNHRARLPADKLFTCDVCGMQFRYLKSFKKH 1165

  Fly   714 -----VER---------------AGKNPAEAANGGGSRLRTSKSASGSITGTHLHPGQATMSSSF 758
                 :||               :|..|:.:|........||.|||||:|..    .|..::||.
  Fly  1166 RLNHALERLHGKKSVGVIGRLGGSGSGPSSSAISVSVAAPTSVSASGSVTSV----DQDVVTSSQ 1226

  Fly   759 EHLPTLRVKNEELQRSVSSPQTQRE-------------------------IITLENPRSSHCPVI 798
            |  |.|..:.|:|:.:|....|..|                         ::..:|..|:.....
  Fly  1227 E--PMLADEGEDLRVNVKREGTADEQSAESRANDLEEHEQDNTVDSAGITMLYQDNNSSASASTS 1289

  Fly   799 RPGPALGCNFCWNTIDGHGRILRRKT-------------------------KYHCPECQ--TNLC 836
            ...|.:..:...::.:...|:...:|                         ::|.|:.|  |:| 
  Fly  1290 ATEPNISSSDGIHSTNKRSRLHHLETDPSYPHHHHHHHHHHHQQQHHQAQHQHHNPQSQLPTHL- 1353

  Fly   837 IVPCFQEYHERL---------NNEAAAASSGAAAGDNQLSSSTTGSGSSSSG-KASPYVSSAGSS 891
                   .|..|         ::.:|||::..||...|:||..||||::.|| ..|..|.|||||
  Fly  1354 -------GHVSLPLVATSAAGSSSSAAAAAVVAAAQAQVSSGATGSGATGSGAPGSGNVGSAGSS 1411

  Fly   892 SSGAG 896
            .:|.|
  Fly  1412 GAGGG 1416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BtbVIINP_647774.2 BTB 24..117 CDD:279045 59/93 (63%)
BTB 32..117 CDD:197585 54/85 (64%)
mamoNP_572932.2 BTB 21..118 CDD:279045 60/96 (63%)
BTB 32..118 CDD:197585 54/85 (64%)
C2H2 Zn finger 1082..1105 CDD:275368 8/22 (36%)
C2H2 Zn finger 1116..1137 CDD:275368 2/20 (10%)
C2H2 Zn finger 1149..1169 CDD:275368 0/19 (0%)
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.100

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