DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp5 and USP13

DIOPT Version :9

Sequence 1:NP_001246589.1 Gene:Usp5 / 38375 FlyBaseID:FBgn0035402 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_003931.2 Gene:USP13 / 8975 HGNCID:12611 Length:863 Species:Homo sapiens


Alignment Length:862 Identity:385/862 - (44%)
Similarity:547/862 - (63%) Gaps:65/862 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EELRKHLSKVNVPCASGAGSPPIYKDECVYSYDNPETPTGLYVCLHSFLGFGEAYVREYADKTGN 66
            |.|..|:..:.|| .||   ..:||:||.:|||:|.:..|||||:::||.||..:|..:..|||.
Human    26 ELLVPHMPTIRVP-RSG---DRVYKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTGQ 86

  Fly    67 RVFLHIQRVKTIKEGADMEAECAESEAGPERKITRLAIGVEGGYNESDM-AKKYEIKDTYSIVVA 130
            .|::|::|  .::|    :...|...|.|:|:.:::.:.::   .:.|: :..||.:|...:|:.
Human    87 SVYMHLKR--HVRE----KVRGASGGALPKRRNSKIFLDLD---TDDDLNSDDYEYEDEAKLVIF 142

  Fly   131 P-HLDKKLPYPDPELPMRVTQSVEAILAADSAIAKLEKATLMGTWDGEVRQASKYADNLQQLDNG 194
            | |.:..||..: |||..||.:.:|:|::.|...|.:.    .||:.|: ..||||:||.|||||
Human   143 PDHYEIALPNIE-ELPALVTIACDAVLSSKSPYRKQDP----DTWENEL-PVSKYANNLTQLDNG 201

  Fly   195 KRIPPSGWQCEKCDLTNNLWLNLTDGSIMCGRKFFDGSGGNDHAVEHYRVTGFPLAVKLGTITAD 259
            .|||||||:|.:|||..||||||||||::||:.|||.||||.||:||||..|:||||||||||.|
Human   202 VRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDMGYPLAVKLGTITPD 266

  Fly   260 GKSDVFSYPEDEMVLDPHLERHLSHFGINMAAMKKSEKSMVELELDINQRIGEWTALTESESELQ 324
            | :||:|:.|:|.||||||.:||:||||:|..|..:|..:  .:.||..|:.||..:.||.::|:
Human   267 G-ADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHGTENGL--QDNDIKLRVSEWEVIQESGTKLK 328

  Fly   325 PVAGPGYTGMRNLGNSCYINSVMQVLFVIPDFQQRFVGTGAERYFKEFPSDPANDFNIQMAKLGT 389
            |:.||||||::|||||||::||||.:|.||:||:.:|| ...|.|...|.||..|||.||.|||.
Human   329 PMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEFQRAYVG-NLPRIFDYSPLDPTQDFNTQMTKLGH 392

  Fly   390 GLQSGKY------SSIAENTLDTDH---STGISPAMFKNIVGKNHPDFSTKQQQDANDFYLHLLT 445
            ||.||:|      |.:.|..:..:|   ..||||.|||..|.|:||:||:.:||||.:|:|||:.
Human   393 GLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVN 457

  Fly   446 LLDRNSRNQTNPADALKFLLEDRVECLASHKVKYNTREEYSFRLPVPLDKATNLDEVREFQERKK 510
            |::||.....||:|..:||:|:|::|..:.||:|..|.:|..:|||.::.|||.||:..::..::
Human   458 LVERNRIGSENPSDVFRFLVEERIQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRR 522

  Fly   511 AARETGQRLPDRDIVRHKVPLQACLERFFGPELIEQFYSTAIGSKTNARKITRLATMPDCLMIHV 575
            .|....:.||  ::||.|:|..|||:.|..||.::.|:|:|:.:|:...|.:|.|:.|:.|::.:
Human   523 EAEANRRPLP--ELVRAKIPFSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQI 585

  Fly   576 GKFTLGDDWVPKKLDVSVDMPDELDLSNWRSAGGLQPGEEALPE-------PATEEVKFA----- 628
            .|||.|.||||||.|||:||||.||:::.| |.|||||||.||:       |...:.:..     
Human   586 KKFTFGLDWVPKKFDVSIDMPDLLDINHLR-ARGLQPGEEELPDISPPIVIPDDSKDRLMNQLID 649

  Fly   629 ---FDEAVMSELLTMGFPPEACKRACYHTKNSGLEAASNWLMEHIADEDISEPFVVPN-NSIGDC 689
               .||:.:.:|..||||.|||::|.|.|.|.|.|.|.||::.|:.:.|.:||..:|. ......
Human   650 PSDIDESSVMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASA 714

  Fly   690 AANQFVAN------PESL-AMLMSMGFDERQAVAALKATDGNVERATDWIFSH----ADSIGVED 743
            .|:.|.|:      ||.: |::.||||...||:.||:||:.|:|||.||||||    .||..|.:
Human   715 GASVFGASGLDNQPPEEIVAIITSMGFQRNQAIQALRATNNNLERALDWIFSHPEFEEDSDFVIE 779

  Fly   744 AAPAANSSAAAASSTPNKTNYRDGRGKYRLVAFISHMGTSAQVGHYVCHIRKKGEWVIFNDSKVA 808
            ....||:: ..:.:.|.....:||.|.|.|.|||||||||...|||:|||:|:|.|||:||.||.
Human   780 MENNANAN-IISEAKPEGPRVKDGSGTYELFAFISHMGTSTMSGHYICHIKKEGRWVIYNDHKVC 843

  Fly   809 KSQNPPKDLGYLYLYMR 825
            .|:.|||||||:|.|.|
Human   844 ASERPPKDLGYMYFYRR 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp5NP_001246589.1 UBP14 24..825 CDD:227532 377/838 (45%)
zf-UBP 204..278 CDD:280334 51/73 (70%)
Peptidase_C19B 333..823 CDD:239123 232/525 (44%)
UBA1_UBP5_like 631..674 CDD:270480 19/42 (45%)
UBA2_UBP5 696..737 CDD:270569 24/51 (47%)
USP13NP_003931.2 UBP14 30..861 CDD:227532 383/858 (45%)
zf-UBP 211..284 CDD:280334 51/73 (70%)
Peptidase_C19B 337..859 CDD:239123 232/526 (44%)
UBA1_UBP13 652..700 CDD:270567 21/47 (45%)
UBA2_UBP5 728..769 CDD:270569 23/40 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 487 1.000 Domainoid score I392
eggNOG 1 0.900 - - E1_COG5207
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 829 1.000 Inparanoid score I464
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53559
OrthoDB 1 1.010 - - D556111at2759
OrthoFinder 1 1.000 - - FOG0002129
OrthoInspector 1 1.000 - - otm41290
orthoMCL 1 0.900 - - OOG6_101380
Panther 1 1.100 - - O PTHR24006
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2324
SonicParanoid 1 1.000 - - X1410
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.870

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