DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp5 and UBP14

DIOPT Version :9

Sequence 1:NP_001246589.1 Gene:Usp5 / 38375 FlyBaseID:FBgn0035402 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_566666.2 Gene:UBP14 / 821610 AraportID:AT3G20630 Length:797 Species:Arabidopsis thaliana


Alignment Length:841 Identity:376/841 - (44%)
Similarity:526/841 - (62%) Gaps:62/841 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEELRKHLSKVNVPCASGAGSPP--IYKDECVYSYDNPETPTGLYVCLHSFLGFGEAYVREYADK 63
            ||.||.:||:|.:|      .|.  |||.||..|:|.|.:..||:|.::|||.||:.||....:|
plant     1 MELLRSNLSRVQIP------EPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEK 59

  Fly    64 TGNRVFLHIQRV-KTIKEGADMEAECAESEAGPERKITRLAIGVEGGYNESDMAKKYEIKDTYSI 127
            |||.|:|||::. |:|.|..            |.:|.|.|||||:||::.::.    |.:::|||
plant    60 TGNPVYLHIKQTRKSIPEDR------------PLKKPTLLAIGVDGGFDNNEP----EYEESYSI 108

  Fly   128 VVAPHLDKKLPYPDPELPMRVTQSVEAILAADSAIAKLEKATLMGTWDGEVRQASKYADNLQQLD 192
            |:.|.. ..||:|..|||.:|..:|:.::.|..|    |:...:..|..|.:..|::|..|||:.
plant   109 VILPDF-VSLPFPSVELPEKVRIAVDTVVNAVGA----ERKEQVAAWTAEKKLISEHALTLQQIK 168

  Fly   193 NGKRIPPSGWQCEKCDLTNNLWLNLTDGSIMCGRKFFDGSGGNDHAVEHYRVTGFPLAVKLGTIT 257
            :|..||||||:|.|||.|.|||||||||.|:||||.:||:|||:||||||:.|.:||||||||||
plant   169 SGIVIPPSGWKCSKCDKTENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETAYPLAVKLGTIT 233

  Fly   258 AD-GKSDVFSYPEDEMVLDPHLERHLSHFGINMAAMKKSEKSMVELELDINQRIGEWTALTESES 321
            || ..:||:|||||:.||||.|..||:||||:.::|:|:|.:..|.|||.|... :|..:.||..
plant   234 ADLEAADVYSYPEDDSVLDPLLAEHLAHFGIDFSSMQKTEMTTAERELDQNTNF-DWNRIQESGK 297

  Fly   322 ELQPVAGPGYTGMRNLGNSCYINSVMQVLFVIPDFQQR-FVGTGAERYFKEFPSDPANDFNIQMA 385
            ||.||.||||||:.|||||||:.:.||::|....|..| |.....:..|:..|:||..|.|:|:.
plant   298 ELVPVFGPGYTGLVNLGNSCYLAATMQIVFSTHSFISRYFSHQSLKMAFEMAPADPTLDLNMQLT 362

  Fly   386 KLGTGLQSGKYSSIA---ENTLDTDHSTGISPAMFKNIVGKNHPDFSTKQQQDANDFYLHLLTLL 447
            |||.||.|||||..|   :.|.......||.|.||||::..:|.:||:.:||||.||:|||:..:
plant   363 KLGHGLLSGKYSMPATQKDATTGDPRQEGIPPRMFKNVIAASHAEFSSMRQQDALDFFLHLVGKV 427

  Fly   448 DR--NSRNQTNPADALKFLLEDRVECLASHKVKYNTREEYSFRLPVPLDKATNLDEVREFQERK- 509
            :|  |:....:|:.:.||.:|:::.| .|.||.||.||:....|.:||.:|||.||:..|.::| 
plant   428 ERASNTTPDLDPSRSFKFGIEEKILC-PSGKVGYNKREDCILSLNIPLHEATNKDELEAFHKQKA 491

  Fly   510 -KAARETGQRLPDRDIVRHKVPLQACLERFFGPELIEQFYSTAIGSKTNARKITRLATMPDCLMI 573
             |...|...|..| :|||.:|||:|||..|...|.||.:||:|:...|.|.|.|.|.:.||.|::
plant   492 GKGLEENDMRSSD-EIVRPRVPLEACLANFASSEPIEDYYSSALKGMTTAIKTTGLTSFPDYLVL 555

  Fly   574 HVGKFTLGDDWVPKKLDVSVDMPDELDLSNWRSAGGLQPGEEALPEPATEEV----KFAFDEAVM 634
            |:.||.:.:.||||||||.:|:||.:|:|:.||. |||||||.||:...|||    :...:|.::
plant   556 HMRKFVMEEGWVPKKLDVYIDVPDVIDISHMRSK-GLQPGEELLPDGVPEEVMESAQPVANEEIV 619

  Fly   635 SELLTMGFPPEACKRACYHTKNSGLEAASNWLMEHIADEDISEPFVVPNNSIGDCAANQFVANPE 699
            ::|::|||....|::|..:|.|:|:|.|.|||:.|:.|.||..|.....:.|          :..
plant   620 AQLVSMGFSQLHCQKAAINTSNAGVEEAMNWLLSHMDDPDIDAPISHQTSDI----------DQS 674

  Fly   700 SLAMLMSMGFDERQAVAALKATDGNVERATDWIFSHADSIGVEDAAPAANSSAAAASSTPNKTNY 764
            |:..|:|.||.|..|..||||:.|::|:||||:|::.:: .|.|...::::||    .||.::..
plant   675 SVDTLLSFGFAEDVARKALKASGGDIEKATDWVFNNPNA-SVSDMDVSSSNSA----QTPAQSGL 734

  Fly   765 RDGRGKYRLVAFISHMGTSAQVGHYVCHIRKKGEWVIFNDSKVAKSQNPPKDLGYLYLYMR 825
            .||.|||:|...:||||||...||||.||.|:|.||||||.||..|.:||||:||:|.:.|
plant   735 PDGGGKYKLFGIVSHMGTSVHCGHYVAHILKEGRWVIFNDDKVGISTDPPKDMGYVYFFQR 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp5NP_001246589.1 UBP14 24..825 CDD:227532 366/814 (45%)
zf-UBP 204..278 CDD:280334 54/74 (73%)
Peptidase_C19B 333..823 CDD:239123 215/501 (43%)
UBA1_UBP5_like 631..674 CDD:270480 17/42 (40%)
UBA2_UBP5 696..737 CDD:270569 18/40 (45%)
UBP14NP_566666.2 UBP14 1..796 CDD:227532 376/841 (45%)
Peptidase_C19B 309..794 CDD:239123 215/502 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 386 1.000 Domainoid score I156
eggNOG 1 0.900 - - E1_COG5207
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55758
Inparanoid 1 1.050 666 1.000 Inparanoid score I153
OMA 1 1.010 - - QHG53559
OrthoDB 1 1.010 - - D556111at2759
OrthoFinder 1 1.000 - - FOG0002129
OrthoInspector 1 1.000 - - oto3177
orthoMCL 1 0.900 - - OOG6_101380
Panther 1 1.100 - - LDO PTHR24006
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1410
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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