Protein Alignment Usp5 and Usp8

DIOPT Version :9

• Sequence 1: NP_001246589.1
• Gene: Usp5 / 38375
• FlyBaseID: FBgn0035402
• Length: 827
• Species: Drosophila melanogaster
• Sequence 2: NP_650948.2
• Gene: Usp8 / 42509
• FlyBaseID: FBgn0038862
• Length: 896
• Species: Drosophila melanogaster
• Alignment Length: 601
• Identity: 112/601 - (18%)
• Similarity: 189/601 - (31%)
• Gaps: 256/601 - (42%)

  Fly   269 EDEMVLDPHLERHLSHFG-------INMAAMKKSEKSMVELELDI---NQRIGEWTALTESESEL 323
            ||..|:...||..|...|       .|.|.:...:::|.....::   :||:.:::
  Fly   496 EDVHVVSDSLESLLQLTGDPDPTIAPNKAEIPTFDRAMKPQPRNVERTSQRVRDFS--------- 551

  Fly   324 QPV----AGPGYTGMRNLGNSCYINSVMQVLFVIPDFQQRFVGTGAERYFKEFPSDPANDFNI-Q 383
             ||    .|.|.||::||||:||:||::|.|...|...:..:....:.|...  |:..|...| :
  Fly   552 -PVIGQNVGRGLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISR--SNKTNGQVIEE 613

  Fly   384 MAKLGTGLQSGKYSSIAENTLDTDHSTGISPAMFKNIVGKNHPDFSTKQQQDANDF------YLH 442
            :|.|...|.:|:|..:|...|             :.:||:....|....|||:::|      :||
  Fly   614 VAALIKELWNGQYKCVASRDL-------------RYVVGQYQKIFRGVDQQDSHEFLTILMDWLH 665

  Fly   443 --LLTLLDRNSRNQTNPADA--LKFL--------------LEDRVECLASHK--VKYNTREEYSF 487
              |.||.....|...:.::.  |:|.              ::..|:|:|.||  ..|.:....|.
  Fly   666 SDLQTLHVPRQREMISASEKAWLEFTKAKESMILHLFYGQMKSTVKCVACHKESATYESFSNLSL 730

  Fly   488 RLPVPLDKATNLDEVREFQERKKAARETGQRLPDRDIVRHKVPLQACLERFFGPELIEQFYSTAI 552
            .||                             |:.::.:    |..|::.:|..|.|..:...:.
  Fly   731 ELP-----------------------------PNSNVCQ----LNQCMDMYFSGERIHGWNCPSC 762

  Fly   553 GSKTNARKITRLATMPDCLMIHVGKFTLGDDWVPKKLDVSVDMPDELDLSNWRSAGGLQPGEEAL 617
            .:|.:|.|...::.:|..|::|:.:|                                      .
  Fly   763 KTKRDAIKKLDISKLPPVLVVHLKRF--------------------------------------Y 789

  Fly   618 PEPATEEVKFAFDEAVMSELLTMGFPPEACKRACYHTKNSG-LEAASNWLMEHIADEDISEPFVV 681
            .:|:                                  ||| .....|:|...:.:.|:
  Fly   790 ADPS----------------------------------NSGSYMKKQNYLRFPLENLDM------ 814

  Fly   682 PNNSIGDCAANQFVANPESLAMLMSMGFDERQAVAALKATDGNVERATDWIFSHADSIGVEDAAP 746
                      |.::|..||.|:
  Fly   815 ----------NPYIARAESRAV------------------------------------------- 826

  Fly   747 AANSSAAAASSTPNKTNYRDGRGKYRLVAFISHMGTSAQVGHYV--CHIRKKGEWVIFNDSKVA- 808
                       || ||        |:|.|..:|.|| .:.|||.  |.....|:|..|:|..|:
  Fly   827 -----------TP-KT--------YQLYAVSNHYGT-MEGGHYTAFCKSANYGKWFKFDDQVVSA 870

  Fly   809 -KSQNPPKDLGYLYLY 823
             .|.|......|:..|
  Fly   871 LDSSNVVSSAAYILFY 886

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp5	NP_001246589.1	UBP14	24..825	CDD:227532	112/601 (19%)
		zf-UBP	204..278	CDD:280334	3/8 (38%)
		Peptidase_C19B	333..823	CDD:239123	94/521 (18%)
		UBA1_UBP5_like	631..674	CDD:270480	5/43 (12%)
		UBA2_UBP5	696..737	CDD:270569	4/40 (10%)
Usp8	NP_650948.2	USP8_dimer	2..113	CDD:286108
		RHOD	148..278	CDD:294087
		UCH	562..886	CDD:278850	95/523 (18%)
		Peptidase_C19R	564..887	CDD:239139	95/523 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456850
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840