DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp5 and Usp10

DIOPT Version :10

Sequence 1:NP_647773.1 Gene:Usp5 / 38375 FlyBaseID:FBgn0035402 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_728554.1 Gene:Usp10 / 38103 FlyBaseID:FBgn0052479 Length:1517 Species:Drosophila melanogaster


Alignment Length:174 Identity:42/174 - (24%)
Similarity:60/174 - (34%) Gaps:58/174 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 CEDSQVLLEETPWLILKADSFFLPSLFSVSSFKQELQMLFPEKDTAFHFLSQY------------ 325
            |..|..|    |..|:|.|:|.|..|:| |.| ..|.:.|      .|||:..            
  Fly    13 CRPSNPL----PLNIVKNDNFSLLLLYS-SPF-SSLLLFF------VHFLTDMAIWFARSKTLVS 65

  Fly   326 -LFHPTNVVWGLITRYYN--------------AYLAKADQRIGIYIGVSESGNEQFQHLIDQI-- 373
             |.|..|:...||.|.|:              |||:.    .|.....|.:...|..||:.||  
  Fly    66 SLRHNLNLSTILIKRDYSHRPIFYTTSQLSSTAYLSP----FGSLRHESTAVETQADHLVQQIDE 126

  Fly   374 ------------LACGTRHKLLPEVDKQRNLPSSQVLNRKSKAV 405
                        :...:..|.:|| ...|.:|..:||:...:.:
  Fly   127 VDAQELDFPGGKVGYTSEMKFIPE-SSSRRIPCYRVLDEDGRII 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp5NP_647773.1 zf-UBP_var 11..77 CDD:407678
zf-UBP 204..278 CDD:460464 2/4 (50%)
Peptidase_C19B 333..823 CDD:239123 21/101 (21%)
UBA1_UBP5_like 631..674 CDD:270480
UBA2_UBP5 696..737 CDD:270569
Usp10NP_728554.1 UCH 1110..1479 CDD:425685
Blue background indicates that the domain is not in the aligned region.

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