DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp5 and Usp15-31

DIOPT Version :9

Sequence 1:NP_001246589.1 Gene:Usp5 / 38375 FlyBaseID:FBgn0035402 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_611959.2 Gene:Usp15-31 / 37954 FlyBaseID:FBgn0050421 Length:1272 Species:Drosophila melanogaster


Alignment Length:1033 Identity:193/1033 - (18%)
Similarity:316/1033 - (30%) Gaps:386/1033 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 REYADKTGNRVFLHIQRVKTIKEGADMEAECAESEAGPERKITRLAIGVEGGYNESDMAKKYEIK 122
            ||.::  |:....|:....|...||.:.|  ..:...|..|.|..|...    :.::.|||  |:
  Fly     8 REQSE--GDAATTHLTTTATATTGAIVAA--GVTTTLPATKTTTTAADT----STTNAAKK--IR 62

  Fly   123 DTYSIVVAPHLDKKLPYPDPELPMRVTQSVEAILAADSAIAKLEKATLMGTWDG-EVRQASKYAD 186
            .|:|:              |..|.|.|:..:..:|..|: |..|.....|..:| ..|:.|..| 
  Fly    63 RTFSM--------------PRNPFRWTRKFKTAVAVTSS-AGAENDNESGKNNGARERRGSHTA- 111

  Fly   187 NLQQLDNGKR------IPPSGWQCEKCDLTNNLWLNLTDGSIMCGRKFFDGSGGNDHAVEHYRVT 245
             :.....|.|      :..|.::......|||   |.|..|        :|:..|..:..     
  Fly   112 -ISSCVGGGRGRSGSIVSLSSYEAPFISSTNN---NTTTAS--------NGNNNNSSSSN----- 159

  Fly   246 GFPLAVKLGTITADGKSDVFSYPEDEMVLDPHLERHLSHFGINMAAMKK----SEKSMVELELDI 306
                 :......|..:|....:..       .:.:|||. .:|:.:.:|    :..:.:|:   :
  Fly   160 -----INSKRTRALRRSSFRKFLN-------RIAQHLSS-TVNVVSEEKHSPANRIAFIEI---V 208

  Fly   307 NQRIGEW----------TALTESES-------------ELQPVAG--------PGYTGMRNLGNS 340
            ....|.|          .:::.|.|             .:.|:.|        ||..|::|.||:
  Fly   209 PFYTGCWRRKEANKHGQPSVSGSSSGGGGGAGGPGGGERVPPIGGYQWPADQTPGVMGLKNHGNT 273

  Fly   341 CYINSVMQVLFVIPDFQQRFVGTGAERYFKEFPSDPANDFNIQMAKLGTGLQSGKYSSIAENTL- 404
            |::|:|:|.|.......:.||       ..::.:|......|...|.||   .|:.:....|.| 
  Fly   274 CFMNAVLQCLSHTDILAEYFV-------LDQYKADLKRRNKINSRKFGT---KGELTEQLANVLK 328

  Fly   405 -------DTDHSTGISPAMFKNIVGKNHPDFSTKQQQDANDFYLHLLTLLD-------------- 448
                   ::||||.     ||.:|.:....|.:..|.||.:|   |..|||              
  Fly   329 ALWTCKNESDHSTS-----FKAVVDRYGTQFRSSTQHDAQEF---LFWLLDKVHEDLNTASKRRY 385

  Fly   449 ---RNSRNQTNPADALKFLLE---------------------------------DRVECLASH-- 475
               :||..:::...|.:.|..                                 |...|::..  
  Fly   386 KSLKNSYGRSDEVIAAETLANHIRCNNSFVQAVFQAQFRSSLTCPRCEKQSNTFDPFHCISVQLP 450

  Fly   476 ---------KVKYNTREEYSFRL--------PV-------------------------------- 491
                     .|.|.||.....|:        |:                                
  Fly   451 QLTQQTIFVTVVYMTRLPRQVRMGLRVPAGSPIVALREQLQADTGIEGSRMVLVDLNAEGFTRVF 515

  Fly   492 ----PLDKATNLD-----EVREFQERKKAA--RETGQ---------------------------- 517
                |::..::::     ||.......|||  .|||.                            
  Fly   516 YDTQPVETLSSIETIYCIEVPAATPVAKAATPSETGDKSAPTAVTPSPAAAQSQADLLLLVANVY 580

  Fly   518 RLPD-RDIVRHKVP-------------LQACLERFFGPELIEQFYSTAIGSKTNARKITRLATM- 567
            |..| .||.|...|             ||..:.|...|.|..:.:|.|          |.||.| 
  Fly   581 RAKDGADITRFGAPFSMKAPRDCSYQDLQKRMLREMAPLLKPEVFSYA----------TPLAEMF 635

  Fly   568 ----------PDCL-----------MIHVGKFTLGDDWVPKKLDVSVDMPDELDLSNWRS----- 606
                      ||..           ||.:....|..:..|:.:.:         |..|.|     
  Fly   636 RIRLQDPSADPDTYLEQVEHPLLTEMIDMALSVLSSEAGPQHIKL---------LLEWSSPEAHF 691

  Fly   607 AGGLQPGEEALPEPATEEV-KFAFDEAVMSELLTMGFPPEACKRACYHTKNSGLEAASNWLMEHI 670
            ....|..|||:.|  .|.| :.:..:...:..||:    |.|..  ::||...|.|...|...| 
  Fly   692 ISKQQDTEEAVVE--HESVARLSASKPSDTAALTL----EQCLE--HYTKAETLSAEDAWRCPH- 747

  Fly   671 ADEDISEPFVVPNNSIG-----DCAANQF-------VANPESLAMLMSMGFDERQAVAALKATDG 723
                 .:.::....::|     |.....|       ...|::..:...:.|       .|.|.|.
  Fly   748 -----CQQYLPVVKTLGLWSLPDILVVHFKRFRQHQSKGPQAAKLTTMVKF-------PLTAFDM 800

  Fly   724 NVERATDWIFSHADSIGV-----------EDAAPAANSSAAAASSTPNKTNYRDGRGKYRLVAFI 777
            :...|.....|.:.|:|:           .:....|.|..:.:|:..::.:.:|.|  |.|.|..
  Fly   801 SPHLARGVHESASSSLGMGTGIGLGLGLGSNPWKKARSVDSRSSTLNSRCDAKDTR--YDLYAVC 863

  Fly   778 SHMGTSAQVGHY--VCHIRKKGEWVIFNDSKVAKSQNPPKDL--------GYLYLYMR 825
            .|.|.:.:.|||  .|......:|..|:|.:|:|.  |..|:        .|:..|.|
  Fly   864 YHQGDTLETGHYTAACKNPYDRQWYKFDDQRVSKV--PEDDIEQDIINNEAYMLFYQR 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp5NP_001246589.1 UBP14 24..825 CDD:227532 192/1031 (19%)
zf-UBP 204..278 CDD:280334 10/73 (14%)
Peptidase_C19B 333..823 CDD:239123 133/712 (19%)
UBA1_UBP5_like 631..674 CDD:270480 10/42 (24%)
UBA2_UBP5 696..737 CDD:270569 7/40 (18%)
Usp15-31NP_611959.2 Peptidase_C19 <262..>383 CDD:271592 37/138 (27%)
Peptidase_C19 266..>461 CDD:271592 41/212 (19%)
Peptidase_C19R <713..918 CDD:239139 44/227 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456891
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.