DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp5 and Usp7

DIOPT Version :10

Sequence 1:NP_647773.1 Gene:Usp5 / 38375 FlyBaseID:FBgn0035402 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_572779.2 Gene:Usp7 / 32169 FlyBaseID:FBgn0030366 Length:1129 Species:Drosophila melanogaster


Alignment Length:729 Identity:128/729 - (17%)
Similarity:235/729 - (32%) Gaps:277/729 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SDMAKKYEIKDT------YSIVVAPHLD-----KKLPYPDPELPMRVTQSVEAILAADSAIAKLE 166
            ||:.:..:.:::      :..::.|.|.     .:||..:..:|.:.       |.|||:.....
  Fly    25 SDLQQTQQQRNSPPQLPKFKNLIQPQLHAVGAVTQLPSENGNMPPQQ-------LLADSSSTSFG 82

  Fly   167 KATLMGTWD----GEVRQASKYA---DNLQQLDNGKRIPPSGWQCEKCDLTNNLWLNLTDGSIMC 224
            ....||..|    .:.|..:.::   :|:.||.:.:..||             :::.:....|| 
  Fly    83 DGEAMGIDDESKEDQFRSETTFSFTVENVVQLKSQRLSPP-------------VYVRMLPWRIM- 133

  Fly   225 GRKFFDGSGGNDHAVEHYRVTGFPLAVKLGTITADGKSDVFSYPED---EMVLDPHLE------- 279
                         .:.:.|..||       .:..:|::|..::..:   |:.|..|..       
  Fly   134 -------------VIPNDRALGF-------FLQCNGENDSPTWSCNAIAELRLKCHKPDAQPFTR 178

  Fly   280 ---RHL----------SHFGINMAAMKKSEKSMVE-----LELDINQRIGE------WTALTESE 320
               :||          |:| |....:|.||||.|.     ||:.:   :.:      |.:...: 
  Fly   179 ARIKHLFYSKENDYGYSNF-ITWQELKDSEKSYVHNNSITLEVHV---VADAPHGVLWDSKKHT- 238

  Fly   321 SELQPVAGPGYTGMRNLGNSCYINSVMQVLFV----------IP---DFQQRFVGTGAERYFKE- 371
                     ||.|::|.|.:||:||::|.|:.          ||   |...:.||...:|.|.| 
  Fly   239 ---------GYVGLKNQGATCYMNSLLQTLYFTNSLRLSVYRIPTEADDSSKSVGLSLQRVFHEL 294

  Fly   372 -FPSDPANDFNIQMAKLGTGLQSGKYSSIAENTLDTDHSTGISPAMFKNIVGKNHPDFSTKQQQD 435
             |...|          :||...:   .|....|||                        :..|.|
  Fly   295 QFGDRP----------VGTKKLT---KSFGWETLD------------------------SFMQHD 322

  Fly   436 ANDFYLHLLTLLDRNSRNQTNPADALKFLLEDRVECLASHK-VKYN-TREEYSFRLPVPLDKATN 498
            ..:|...||..|:...:. |.....:..|.|.::......| |.|| ||.|..:.:.:.:....|
  Fly   323 VQEFLRVLLDKLESKMKG-TILEGTIPGLFEGKMSSYIKCKNVDYNSTRYETFYDIQLNIKDKKN 386

  Fly   499 LDEVREFQERKKAARETGQRLPDRDIVRHKVPLQACLERFFGPELIE--QFYSTAIGSKTNARKI 561
            :.|  .||:                              :..||.:|  ..|...:.....|.|.
  Fly   387 IYE--SFQD------------------------------YVAPETLEGDNKYDAGVHGLQEASKG 419

  Fly   562 TRLATMPDCLMIHVGKF---TLGDDWVPKKLDVSVDMPDELDLSNWRSAGGLQPGEEALPE---- 619
            ....:.|..|.:|:.:|   .:.|..:  |.:...:..:.::|..:     |...|..|.:    
  Fly   420 VIFTSFPPVLHLHLMRFQYDPVTDSSI--KYNDRFEFYEHINLDRY-----LAESENTLADYVLH 477

  Fly   620 -------------------PATEEVKFAFDEAVMSELLTMGFPPEACKR--------------AC 651
                               |..:...|.||:.|:|          :|::              ..
  Fly   478 AVLVHSGDNHGGHYVVFINPKADGRWFKFDDDVVS----------SCRKQEAIEQNYGGMDDEIS 532

  Fly   652 YHTKNSGL-------EAASNWLMEHIADEDISEPFV-----------VPNNSIGDCAANQFVANP 698
            :|.|.|..       ::..:.::..|.:.:||...|           ......|:  ||.:|   
  Fly   533 FHAKCSNAYMLVYIRQSELDRVLGDITESEISSDLVERLDLEKRIEMARRKERGE--ANTYV--- 592

  Fly   699 ESLAMLMSMGFDER 712
             |:.:::...|:|:
  Fly   593 -SVHVILEENFEEQ 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp5NP_647773.1 zf-UBP_var 11..77 CDD:407678
zf-UBP 204..278 CDD:460464 9/76 (12%)
Peptidase_C19B 333..823 CDD:239123 82/457 (18%)
UBA1_UBP5_like 631..674 CDD:270480 7/63 (11%)
UBA2_UBP5 696..737 CDD:270569 3/17 (18%)
Usp7NP_572779.2 Peptidase_C19 101..1119 CDD:470612 113/646 (17%)
Blue background indicates that the domain is not in the aligned region.

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