DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp5 and ubp14

DIOPT Version :9

Sequence 1:NP_001246589.1 Gene:Usp5 / 38375 FlyBaseID:FBgn0035402 Length:827 Species:Drosophila melanogaster
Sequence 2:NP_596085.1 Gene:ubp14 / 2541157 PomBaseID:SPBC6B1.06c Length:775 Species:Schizosaccharomyces pombe


Alignment Length:865 Identity:272/865 - (31%)
Similarity:417/865 - (48%) Gaps:142/865 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 HLSKVNVPCASGAGSPPIYKDECVYSYDNPETPTGLYVCLHSF-LGFGEAYVRE---YADKTGNR 67
            ||::.||....  .|..||::|||..:::.:...|:.:||..| .|.||..::.   :.::|.:.
pombe     5 HLTETNVVIPD--NSQVIYREECVRCFNSQDEEGGIDLCLTCFQSGCGETGLKHSLVHFEQTLHP 67

  Fly    68 VFLHIQRVKTIKEGADMEAECAESEAGPERKITRLAIGVEGGYNESDMAKKYEIKDTYSIVVAPH 132
            :.:.|.|....|...:           |.:|||:|.|     ..:||       :|.|.....|.
pombe    68 IVVTIARQPKQKINDE-----------PPQKITKLEI-----REDSD-------EDLYDYFYVPK 109

  Fly   133 ---LDKKLPYPDPELPMRVTQSVEAILAADSAIAKLEKATLMGTWDGEVR---------QASKYA 185
               .:..|...||.|.:    |:||:..|..|..|.:    :..|:.|:.         :...|.
pombe   110 CLVCNIILDIQDPLLSL----SLEAMKNATKASNKSQ----LTAWENELTTCDHIINLPENETYV 166

  Fly   186 DNLQQLDNGKRIPPSGWQCEKCDLTNNLWLNLTDGSIMCGRKFFDGSGGNDHAVEHYRVTGFPLA 250
            .|   |||.        .|.||||..|||:.||.|::.||||.:.|.|||.||:.||..||.|||
pombe   167 TN---LDNA--------TCSKCDLAENLWMCLTCGALSCGRKQYGGGGGNGHALSHYDDTGHPLA 220

  Fly   251 VKLGTITADGKSDVFSYPEDEMVLDPHLERHLSHFGINMAAMKKSEKSMVELELDINQRIGEWT- 314
            |||.:|:.||::|::.|..||..:||:::.|:.:|||::|.:.|:|||:.||:|:.|.   .|. 
pombe   221 VKLKSISPDGQADIYCYSCDEERIDPNIKTHMLNFGIDIAKLNKTEKSLAELQLEQNL---NWDF 282

  Fly   315 ALTESESELQPVAGPGYTGMRNLGNSCYINSVMQVLFVIPDF---QQRFVGTGAERYFKEFPSDP 376
            ..:|.:...:.:.|||.||::|||||||:.|.||.||.|.:|   :.....|     :......|
pombe   283 GASEEDDASKRLFGPGLTGLKNLGNSCYLASTMQSLFSIKEFAIHELNLFNT-----YNSVCQTP 342

  Fly   377 ANDFNIQMAKLGTGLQSGKYSSIAENTLDTDHST-------GISPAMFKNIVGKNHPDFSTKQQQ 434
            ..|...|:.||..||.|||:|..::..|..:.|:       |:.|.|||::||:.|.:|.|.|||
pombe   343 TTDLQCQLGKLADGLVSGKFSKPSKIGLLNNPSSSILPYQDGLRPFMFKDVVGQGHSEFGTSQQQ 407

  Fly   435 DANDFYLHLLTLLDRNSRNQTNPADALKFLLEDRVECLASHKVKYNTREEYSFRLPVPLDKATNL 499
            ||.:|.|:||..:.::|..:|:......|..|.::.||:..:|:|::.......|.||..|...:
pombe   408 DAYEFLLYLLGKIRKSSIAKTDITKIFDFETEQKLSCLSCKRVRYSSFSSQGLTLTVPRVKIGEI 472

  Fly   500 DEVREFQERKKAARETGQRLPDRDIVRHKVPLQACLERFFGPELIEQFYSTAIGSKTNARKITRL 564
            :..:.::|                     |.:..||:....|:.:| :...|..||..|...|.:
pombe   473 EGEQIYEE---------------------VSIDQCLDATIQPDQME-YTCEACKSKLGATTTTAM 515

  Fly   565 ATMPDCLMIHVGKFTLGDDWVPKKLDVSVDMPDELDLSNW-RSAGGLQPG-EEALPEPATEEVKF 627
            .:.|..|::...:|.| ..:..|||.:.: :.:|..:.|: |......|. |:.||| .||.:: 
pombe   516 KSFPKVLILQANRFDL-QGYQVKKLSIPI-IVNEDGIYNFDRLMAKDHPNDEDYLPE-KTETIE- 576

  Fly   628 AFDEAVMSELLTMGFPPEACKRACYHTKNSGLEAASNWLMEHIADEDISEPFVV------PNNSI 686
             ::::.:.:|..||||...|:||...|.||..|.|.|||.||:.|.:|.:|..|      .::|:
pombe   577 -WNQSAIEQLQAMGFPLVRCQRALLATGNSDTETAMNWLFEHMEDPEIDKPIEVSELLPKADSSV 640

  Fly   687 GDCAANQFVANPESLAMLMSMGFDERQAVAALKATDGNVERATDWIFSHADSIGVEDAAPAANSS 751
            .:          |::..|...||...||...|..::.|:|||.|||.:|.|....|.....::||
pombe   641 SE----------ENVQSLCEFGFTVAQARKGLLESNNNIERAVDWILNHPDESFEEPPLEGSDSS 695

  Fly   752 -----AAAASSTPNKTNYRDGRGKYRLVAFISHMGTSAQVGHYVCHIRK----KGEWVIFNDSKV 807
                 ..:..||....|       |.|.|.|||.|:||..||||..|||    |.:||:|||.||
pombe   696 IKNENMGSWESTNVPVN-------YNLKAIISHKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKV 753

  Fly   808 AK--SQNPPKDLGYLYLYMR 825
            .:  |....|..||:||:.|
pombe   754 LQVASLEEAKTTGYVYLFER 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp5NP_001246589.1 UBP14 24..825 CDD:227532 266/846 (31%)
zf-UBP 204..278 CDD:280334 40/73 (55%)
Peptidase_C19B 333..823 CDD:239123 162/518 (31%)
UBA1_UBP5_like 631..674 CDD:270480 19/42 (45%)
UBA2_UBP5 696..737 CDD:270569 15/40 (38%)
ubp14NP_596085.1 UBP14 1..774 CDD:227532 272/865 (31%)
ZnF_UBP 24..77 CDD:197632 13/52 (25%)
zf-UBP 174..247 CDD:280334 39/72 (54%)
Peptidase_C19B 301..772 CDD:239123 163/519 (31%)
UBA1_spUBP14_like 578..624 CDD:270568 19/45 (42%)
UBA2_spUBP14_like 642..680 CDD:270483 14/47 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 218 1.000 Domainoid score I566
eggNOG 1 0.900 - - E1_COG5207
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 348 1.000 Inparanoid score I485
OMA 1 1.010 - - QHG53559
OrthoFinder 1 1.000 - - FOG0002129
OrthoInspector 1 1.000 - - oto101221
orthoMCL 1 0.900 - - OOG6_101380
Panther 1 1.100 - - LDO PTHR24006
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2324
SonicParanoid 1 1.000 - - X1410
TreeFam 1 0.960 - -
1312.860

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