DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alg2 and algn-2

DIOPT Version :9

Sequence 1:NP_647772.1 Gene:Alg2 / 38374 FlyBaseID:FBgn0035401 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_495010.2 Gene:algn-2 / 173912 WormBaseID:WBGene00017282 Length:400 Species:Caenorhabditis elegans


Alignment Length:414 Identity:188/414 - (45%)
Similarity:278/414 - (67%) Gaps:22/414 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRVLFLHPDLGIGGAERLVVDAALALKERGHQVSFLTNHHDSTHCFKETADGTFPVHVVGDWLP 65
            ||||..|||||||||||||:||||:.|::|||.|...||.:..:|||:||.|  ..:..|..|:|
 Worm     1 MVRVTILHPDLGIGGAERLIVDAAVGLQDRGHSVRIFTNQYSRSHCFQETLD--LDICTVVPWIP 63

  Fly    66 RGLFGRFYAICAYLRMLYAAIYASFFMPQREQVDVVVCDLISVCIPVLR-FAPHRPKVLFYCHFP 129
            |.:||:.:|:||||:|:.||:|...:   .:..||::.|.:|....||| |:  :.|::||||||
 Worm    64 RSIFGKGHALCAYLKMIIAALYIVIY---HKDTDVILSDSVSASQFVLRHFS--KAKLVFYCHFP 123

  Fly   130 DQLLSSREGLLKRLYRLPINWLEEHTIGLADKVLVNSKFTLRVFQDTFRRLSTVP-DVLYPSLHT 193
            |:||:.|:|.||..||..|:|:||:|.||||.:.|||.||..|.::||:.|::.. .||||||:|
 Worm   124 DRLLTKRDGNLKAFYRNIIDWIEEYTTGLADVICVNSNFTKNVVRETFKSLASQELTVLYPSLNT 188

  Fly   194 QYFDQMQKKLEQRSALLDEPVHPRVPLNA-FIYLDINRYERKKNHALALHSLRLLGDMLPATDFK 257
            ::||.::         ..:.....:|... :::..:||:|||||..|||.:...|...|||.:|.
 Worm   189 EFFDSIE---------ASDDFGEEIPRGTKYVFTSLNRFERKKNIVLALDAFEKLKSNLPADEFS 244

  Fly   258 RCRLIIAGGYDTRCMENVEHFAEL-EHLTEELKL-QDHVVLLRSPTDEEKCRLLFAAHCLLYTPE 320
            :|.|:||||||.:..||:||:.|| ||: ::|:| .|.:|.|.||:|.:|..|:..:..:||||:
 Worm   245 QCHLVIAGGYDLKNPENIEHYDELVEHM-KKLELPADQIVFLHSPSDTQKVNLIRRSRAVLYTPD 308

  Fly   321 NEHFGIVPLEGMYCSKPVVALNSGGPTETVVSTSTGFLCEKTEKSFGGAMLQLFRDEQLRVKMGD 385
            .|||||||:|.||...||:|:|:|||.|:|.:..||||.::|.::|...|:.|.:||::..:|.:
 Worm   309 REHFGIVPVEAMYLGTPVIAVNTGGPCESVRNNETGFLVDQTAEAFAEKMIDLMKDEEMYRRMSE 373

  Fly   386 QGHKRVQQKFSFQAFADRLNGIIR 409
            :|.|.||:.|:|:|||.:|:.||:
 Worm   374 EGPKWVQKVFAFEAFARKLDEIIQ 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alg2NP_647772.1 RfaB 1..412 CDD:223515 188/414 (45%)
GT1_ALG2_like 2..404 CDD:99977 184/406 (45%)
algn-2NP_495010.2 RfaB 1..400 CDD:223515 188/414 (45%)
GT1_ALG2_like 2..392 CDD:99977 184/406 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167479
Domainoid 1 1.000 161 1.000 Domainoid score I2459
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5930
Inparanoid 1 1.050 360 1.000 Inparanoid score I1284
Isobase 1 0.950 - 0 Normalized mean entropy S1110
OMA 1 1.010 - - QHG53746
OrthoDB 1 1.010 - - D1339573at2759
OrthoFinder 1 1.000 - - FOG0005034
OrthoInspector 1 1.000 - - oto20608
orthoMCL 1 0.900 - - OOG6_102563
Panther 1 1.100 - - LDO PTHR45918
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R41
SonicParanoid 1 1.000 - - X3559
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

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