DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11537 and CG42514

DIOPT Version :9

Sequence 1:NP_001097489.1 Gene:CG11537 / 38373 FlyBaseID:FBgn0035400 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_730171.1 Gene:CG42514 / 8674108 FlyBaseID:FBgn0260388 Length:533 Species:Drosophila melanogaster


Alignment Length:564 Identity:116/564 - (20%)
Similarity:226/564 - (40%) Gaps:108/564 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 VCGGSGGAAHRRTHSAASYISMRSQGGNSEATPERPKRNR-----FFEWI-RVVCNICCCKSSGI 248
            |.|.....|.:|.:|.:|..|..::  ||.:...|.:|:.     ..:|. .||      ||:.:
  Fly     3 VTGAHSENAAQRRNSRSSENSEDNE--NSASGTVREQRDEAAGRTVLQWAWHVV------KSTSV 59

  Fly   249 GEPSVHHALVVIFLEFFAWGL-------------------LTMPIISTL----NQTFPDHTFLMN 290
             ||:       :||..||:.:                   .|..|...|    |:.|.....|.|
  Fly    60 -EPT-------MFLYMFAFMITSVVEQNFFLYKSCRVNRNFTEEICRNLNKPENEEFRTKAMLTN 116

  Fly   291 GLVMGIKGI----LSFLSAPLIGALSDIWGRKFFLLVTV----FFTCLPIPLMSINTWWFFAMI- 346
            ...:..:.|    ...:.|..:|:.||..|||..||:.:    |::.:.:....:.||....:| 
  Fly   117 AWFLQWENISAHVFPIILALFLGSFSDRRGRKLPLLMGLVGKFFYSTMIVVNARMTTWPVQNIIY 181

  Fly   347 ------SISGAFAVTFSVVFAYVADVTTPEERSKAYGLASATFAASLVISPALG-----NALMEM 400
                  :::||....|:..|||::|:::.::|:....:....:.:::.:..|||     |...:.
  Fly   182 SATLPSALTGADVAIFASCFAYISDISSLQQRTIRVTILDVIYLSAMPMGVALGSHLFYNVFNQS 246

  Fly   401 YGDTLVVALSTAIALLDVFFILVAVPESLSEKMRP-------ASWGAPISWEQADPFLAL----R 454
            |.|...|  :.::..|.:.:.|.|:....:.:.|.       ..||.....:.....||:    |
  Fly   247 YADMFTV--NASLLALAIIYTLCALKWQTTPRQRSLRELGCCGFWGDFFDKQHVKDSLAVLVKPR 309

  Fly   455 KVGTDKTVLMLCLTVLLSYLPEAGEYSCMFVYLKLKMGFN---YVEVSVFIAIVGILSITVQVTL 516
            | |..::.|::.|..:..|..:..|...:::|...|..::   |.....|.:...::::.:.|.|
  Fly   310 K-GHRRSFLIILLVSMALYTFQRDEGQYLYMYTLGKFDWDVSAYSNFKTFKSSAYVIAMLLAVPL 373

  Fly   517 GSFMQVFGAKRTIIMGL---ALEIVQLLWYGFGSQKWMMWSAGVVAALGSITYPAISAFVSLYAA 578
              ..::.|.:.|.|:.:   |..|.:|.:| |.:...::::..||.:||.|..|.|.|..|....
  Fly   374 --MNKILGWRDTTIIFIGTWAHSIARLFFY-FATNTDLLYAGAVVCSLGPIVGPMIRAMTSKIVP 435

  Fly   579 PESQGAVQGMITGMRGLCNGLGPAVFGVVF-YLFNVDLNDDHDSHAKSSGSRATNVEKISQHVPG 642
            ...:|.|..:::    :|:...|.:.||.: .|:....|.:|..          ||..::.....
  Fly   436 TSERGKVFALLS----VCDNAVPFISGVCYSQLYRRTQNTNHGG----------NVFILTIATQI 486

  Fly   643 PPFVFGALCVFCAI----IVSAFIPEGQTSTLEKKRASLDVQYE 682
            ..||. .||:...:    :....:||.::..:.:..|.|:.:.|
  Fly   487 AVFVM-ILCLHIVLGKNSLAVPEVPEKESGLISQTEAVLEAEIE 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11537NP_001097489.1 MFS 256..612 CDD:119392 85/416 (20%)
MFS_1 257..601 CDD:284993 81/403 (20%)
CG42514NP_730171.1 MFS_1 129..458 CDD:284993 70/338 (21%)
MFS 132..495 CDD:119392 80/383 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2816
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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