DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11537 and SIT1

DIOPT Version :9

Sequence 1:NP_001097489.1 Gene:CG11537 / 38373 FlyBaseID:FBgn0035400 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_010849.3 Gene:SIT1 / 856644 SGDID:S000000791 Length:628 Species:Saccharomyces cerevisiae


Alignment Length:593 Identity:115/593 - (19%)
Similarity:207/593 - (34%) Gaps:196/593 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 EPSVHHALVV----------------IFLEFFAWGL-----LTMPIISTLNQTFPDHTFLMNGLV 293
            :|.||:..:.                :||..:|:||     .|....:|  .::..|:.|  ..|
Yeast    51 DPGVHNIEIYAEMYNRPIYRVALFFSLFLIAYAYGLDGNIRYTFQAYAT--SSYSQHSLL--STV 111

  Fly   294 MGIKGILSFLSAPLIGALSDIWGRKFFLLVTVFFTCLP--IPLMSINTWWF-----FAMISISG- 350
            ..||.:::.:.......||||:||...::|::.|..:.  |...::|...|     |..:.::| 
Yeast   112 NCIKTVIAAVGQIFFARLSDIFGRFSIMIVSIIFYSMGTIIESQAVNITRFAVGGCFYQLGLTGI 176

  Fly   351 -----AFAVTFS----------------VVFAYVA-DVTTPEERSKAYGLASATFAASLVISPAL 393
                 ..|..||                ::..::: :||:..:.:..:|:....|...|...| |
Yeast   177 ILILEVIASDFSNLNWRLLALFIPALPFIINTWISGNVTSAIDANWKWGIGMWAFILPLACIP-L 240

  Fly   394 G----------------------NALMEMYGDTLVVALS------TAIALLDVFFILVAVPESLS 430
            |                      .||.::...:..:.::      ..:.|:.|||..|.||.:|:
Yeast   241 GICMLHMRYLARKHAKDRLKPEFEALNKLKWKSFCIDIAFWKLDIIGMLLITVFFGCVLVPFTLA 305

  Fly   431 ----EKMRPASWGAP--ISWEQADPFLALRKVGTDKTVLM---------LCLTVLLSYLPE---- 476
                |:.:.|....|  |.|....|...|.::...:..|.         :...:|:::...    
Yeast   306 GGLKEEWKTAHIIVPEVIGWVVVLPLYMLWEIKYSRHPLTPWDLIQDRGIFFALLIAFFINFNWY 370

  Fly   477 -AGEYSCMFVYLKLKMGFNYVEVSVFIAIVGILSITVQVTLGSFM-QVFGAKRTIIMGLALEIVQ 539
             .|:|  |:..|.:.:..:....:...::...:|:.|...||..: :|...|..||.|::..||.
Yeast   371 MQGDY--MYTVLVVAVHESIKSATRITSLYSFVSVIVGTILGFILIKVRRTKPFIIFGISCWIVS 433

  Fly   540 ---LLWYGFGSQKWMMWSAGVVAAL-------GSITYPAISAFVSLYAAPESQGAVQGMITGMRG 594
               |:.|...|..    .:|::.:|       ||.|| ...|.:...|...::.||   :|.:..
Yeast   434 FGLLVHYRGDSGA----HSGIIGSLCLLGFGAGSFTY-VTQASIQASAKTHARMAV---VTSLYL 490

  Fly   595 LCNGLGPAVFGVVFYLFNVDLNDDHDSHAKSSGSRATNV--EKISQHVPGP---------PFVF- 647
            ....:|.| ||                 :..||:..||:  ::||:.:..|         ||.| 
Yeast   491 ATYNIGSA-FG-----------------SSVSGAVWTNILPKEISKRISDPTLAAQAYGSPFTFI 537

  Fly   648 ---------------------GALC----VFC-AIIVSAFIPEGQTST----------LEKKRAS 676
                                 ..||    ||| .::..||:......|          ||.|.. 
Yeast   538 TTYTWGTPERIALVMSYRYVQKILCIIGLVFCFPLLGCAFMLRNHKLTDSIALEGNDHLESKNT- 601

  Fly   677 LDVQYEIE 684
                :|||
Yeast   602 ----FEIE 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11537NP_001097489.1 MFS 256..612 CDD:119392 88/465 (19%)
MFS_1 257..601 CDD:284993 84/453 (19%)
SIT1NP_010849.3 MFS_ARN_like 70..582 CDD:340880 105/544 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341838
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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