DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11537 and ATR2

DIOPT Version :9

Sequence 1:NP_001097489.1 Gene:CG11537 / 38373 FlyBaseID:FBgn0035400 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_014006.1 Gene:ATR2 / 855322 SGDID:S000004892 Length:540 Species:Saccharomyces cerevisiae


Alignment Length:538 Identity:109/538 - (20%)
Similarity:194/538 - (36%) Gaps:154/538 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 SSSSSSSSTSTSPQTSRYAAAAAHPSAAFAETAITASSGSGRVCGGSGGAAHRRTHSAASYISMR 212
            ||:.|:..|:.||.......::......|..|.:.|     ::...:|     :|| |...:::.
Yeast    44 SSTKSTQVTNDSPWQDPTYFSSFGKELMFIATCMLA-----QLLNQAG-----QTH-ALCIMNVL 97

  Fly   213 SQGGNSEATPERPKRNRFFEWIRVVCNICCCK----SSGIGE-PSVHHALVVIFLEFFAWGLLTM 272
            |:..||||..:        .|:.....:....    |..:|: ..:...|:|.::....|.    
Yeast    98 SKSFNSEANNQ--------AWLMASFPLAAGSFILISGRLGDIYGLKKMLIVGYVIVIVWS---- 150

  Fly   273 PIISTLNQTFPDHTFLMN-------GL------VMGIKG------------ILSFLS--APLIGA 310
             |||.|::......|.:.       |:      :||:.|            ::||:.  ||..|.
Yeast   151 -IISGLSKYSNSDAFFITSRAFQGVGIAFILPNIMGLVGHVYKVGSFRKNIVISFIGACAPTGGM 214

  Fly   311 LSDIWGRKFFLLVTVFFTCLPIPLMSINTW-WFFAMISISGAFAVTFSVVFAYVA---DVTTPEE 371
            ...::|.   |:||          ...|.| |.|....|    |...|::.|:.:   :|.|   
Yeast   215 FGGLFGG---LIVT----------EDPNQWPWVFYAFGI----ATFLSLLMAWYSIPNNVPT--- 259

  Fly   372 RSKAYGLA-----SATFAASLVISPALGNALMEMYGDT--LVVALSTAIALLDVFFILVAVPESL 429
              ..:||:     ||.....|::...:.|....:..|.  ::|.|..::..|..||:.    || 
Yeast   260 --NIHGLSMDWTGSALAIIGLILFNFVWNQAPIVGWDKPYIIVLLIISVIFLVAFFVY----ES- 317

  Fly   430 SEKMRPASWGAPISWEQADPFLALRKVGTDKTVLMLCLTVLLSYLPEAGEYSC-MFVYLKLKMGF 493
                           :.|:..|..|.:..::.::|:.|.|.|.:    |.:.. .|.|:..::..
Yeast   318 ---------------KYAEVPLLPRAMTKNRHMIMILLAVFLGW----GSFGIWTFYYVSFQLNL 363

  Fly   494 NYVE-------VSVFIAIVGILSITVQVTLGSFMQVFGAKRTIIMGLALEI-VQLLWYGFGS--- 547
            .:..       ..||: |.|        ::.:|...|..||   :|.||.: ..|:.:..||   
Yeast   364 RHYSPVWTGGTYFVFV-IFG--------SMAAFFVAFSIKR---LGPALLLCFSLMAFDAGSIMF 416

  Fly   548 -------QKWMM-WSAGVVAALG-SITYPAISAFVSLYAAPESQG----AVQGMITGMRGLCNGL 599
                   ..|.: ::...:...| .:::||.|..:|.....:.||    .|..:|.....||.|:
Yeast   417 SVLPVEQSYWKLNFAMQAILCFGMDLSFPASSIILSDGLPMQYQGMAGSLVNTVINYSASLCLGM 481

  Fly   600 GPAVFGVVFYLFNVDLND 617
            |    |.|.:..|...||
Yeast   482 G----GTVEHQINKSGND 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11537NP_001097489.1 MFS 256..612 CDD:119392 85/418 (20%)
MFS_1 257..601 CDD:284993 82/406 (20%)
ATR2NP_014006.1 MFS_Amf1_MDR_like 74..519 CDD:341029 102/508 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341863
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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