DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11537 and VBA3

DIOPT Version :9

Sequence 1:NP_001097489.1 Gene:CG11537 / 38373 FlyBaseID:FBgn0035400 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:416 Identity:87/416 - (20%)
Similarity:136/416 - (32%) Gaps:105/416 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 IRVVCNICCCKSSGIGEPSVHHALVVIFLE-FFAWGLLTMPIISTLNQTFPDHT-----FLMNGL 292
            ::.:|.:..|  :.:||.|  ..||:..|. .||...:..|||   ...|..|.     |.:|..
Yeast    18 LQTLCFVIGC--TMVGERS--RPLVISILSCAFAVAAIVGPII---GGAFTTHVTWRWCFYINLP 75

  Fly   293 VMGI-------------KGILSFLSAPLIGALSDIWGRKFFLLVTVFFTCLPIPLMSINTWWFFA 344
            :.|:             ||||..:. ..||.:|.....||...|.  |..|...::....::.||
Yeast    76 IGGLAIIMFLLTYKAENKGILQQIK-DAIGTISSFTFSKFRHQVN--FKRLMNGIIFKFDFFGFA 137

  Fly   345 MISISGAFAVTFSVVFAYVADVTTPEERSKAYGLASATFAASLVISPALGNALMEMYGDTLVVAL 409
            :.| :|.......:.|.           ...|...|....|.||:...|           .:.:|
Yeast   138 LCS-AGLVLFLLGLTFG-----------GNKYSWNSGQVIAYLVLGVLL-----------FIFSL 179

  Fly   410 STAIALLDVFFILVAVPESLSEKMRPASWGAPISWEQADPFLALRKVGTDKTVLMLCLTVLLSYL 474
            .....|.|.|     .||..:...||               |.||::.....::::.:...|...
Yeast   180 VYDFFLFDKF-----NPEPDNISYRP---------------LLLRRLVAKPAIIIINMVTFLLCT 224

  Fly   475 PEAGE--YSCMFVYL-----KLKMGFNYVEVSVFIAIVGILSITVQVTLGSFMQVFGAKRTIIMG 532
            ...|:  ||..|..|     ..|.|.:.:.:.:...|..|.|..:...||.      .|..:|.|
Yeast   225 GYNGQMIYSVQFFQLIFASSAWKAGLHLIPIVITNVIAAIASGVITKKLGL------VKPLLIFG 283

  Fly   533 LALEIVQLLWYGFGSQKWMMWSAGVVAALGSITYPAISAFVSLYAA------------PESQG-- 583
            ..|.::     |.|....|..::.....:|.:..|..|...:|.|:            ||:..  
Yeast   284 GVLGVI-----GAGLMTLMTNTSTKSTQIGVLLLPGFSLGFALQASLMSAQLQITKDRPEAAMDF 343

  Fly   584 -AVQGMITGMRGLCNGLGPAVFGVVF 608
             .|....|.|:.|...||..:...||
Yeast   344 IEVTAFNTFMKSLGTTLGGVLSTTVF 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11537NP_001097489.1 MFS 256..612 CDD:119392 82/394 (21%)
MFS_1 257..601 CDD:284993 79/384 (21%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 85/414 (21%)
MFS <1..>181 CDD:421695 42/195 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341895
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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