DRSC/TRiP Functional Genomics Resources

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Protein Alignment promL and prom1a

DIOPT Version :9

Sequence 1:NP_001261351.1 Gene:promL / 38372 FlyBaseID:FBgn0026189 Length:1013 Species:Drosophila melanogaster
Sequence 2:XP_021336643.1 Gene:prom1a / 322857 ZFINID:ZDB-GENE-030131-1577 Length:902 Species:Danio rerio


Alignment Length:911 Identity:194/911 - (21%)
Similarity:354/911 - (38%) Gaps:182/911 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 AMNPIFNFTH-FLYDKVLYRDEPIPEGYIVVKNSD---TLSLGPKVEENDWRDLLAHYWMV--LI 168
            |:..:||..| ||:   :.:..|.||..::....|   .:....:..||....|...|:.:  ::
Zfish    55 AIGILFNMMHAFLF---VVQPNPFPEDLVISAAKDKFGAIQSEYQKPENIVLTLQVIYYELGFVV 116

  Fly   169 WVVILVVLIIVIPFIAVCYCCFCCCRRC------RQGCPPCTSKQDAQRRFCCGICLLILIIGLI 227
            ...:.::..:::|.:.:.:|...||..|      ||       :::|.   |....|..|::...
Zfish   117 CAALGLLFTVLLPLVGLLFCLCRCCDNCGGEMHQRQ-------RKNAD---CLRGLLTTLLLTTT 171

  Fly   228 F----GIIIAFVTNKMIDSGFAETSETMKRGSEDTCTYLKDVADHVHHLMMYNYEEMETHVLDQL 288
            |    |::.|:..|:.:.|........:|...:|..|:.......:.:|:. .|..::..||..|
Zfish   172 FIITAGVLCAYAANQNLSSQLKGMRRLVKSNLKDLHTFANQTPAQIDYLIS-RYGTVKEQVLHDL 235

  Fly   289 THA--------HRHIFLDLSDTSES-------------NSLAEMERVLENMPEALELMRQ-VEKM 331
            .:.        |..:..::....::             .::.:.:..|||:...||.::: ..|:
Zfish   236 ENVGVILGGRIHEELGKEVKPALDATLSMTGIKVEKAIKAMRDTKDALENVSLTLETLQEGTVKL 300

  Fly   332 EKDLRFYGSQLRDGVRGIKRD---VNFAVANLCQLQMCQKFLISSNIEHIDSSQCLHFDNLPNTK 393
            :.:|    |.:|:.:|....|   |:.....:|:                            |.:
Zfish   301 QANL----SVVRNSLRNALNDPVCVDAPAPEICR----------------------------NIR 333

  Fly   394 EFVEGMENIVASEYYAIPQRGLSRLKKVSDKVKTQLSFVVPPMMRDLTKGRTIFREHATNV---- 454
            ..:..:|  :|:.|.::|. ...:|.||:|.:||.||.:|       .||...|.:....|    
Zfish   334 NSIPKLE--IAANYSSLPD-VTDQLNKVNDVLKTDLSQIV-------AKGIASFNDTPAMVTAQT 388

  Fly   455 RNIVEGV---LSDI------HIKTL--------------HSTKSFEDVY---ERFGHDRNVVSLI 493
            |||||||   |.||      ..|.|              |:....||:|   ::....|.:..:.
Zfish   389 RNIVEGVKVLLDDIGNNITSFSKMLPVHSSLANFTRMISHTHSQIEDIYPQIDQMDFYRWIGCIT 453

  Fly   494 VCLLILLVLFILIFALLCGCFGRRR----TGYGDECCSKSTGATCLLLAILLIFCVFSFIALVGL 554
            :|.:|:|:|......||||..|..|    |..|   |..:||...|:..:...| :||:: |:|:
Zfish   454 LCCMIVLILTFNFLGLLCGILGFDRHASPTTRG---CVSNTGGNFLMAGVGFSF-LFSWV-LMGV 513

  Fly   555 F--YFMLGMVTYQGACAPLRDQENNTLFRQLDASIDLN----HYLPPSESNKEVVQPLKMSSAIK 613
            .  .|:.|....:..|.|.:.::   ||:.||....:|    :::|....| :....|...|...
Zfish   514 ITALFLAGGNLEKLVCEPFQTRQ---LFKVLDTPYLVNSAWRNFIPGYLYN-DPEMDLTAYSLYS 574

  Fly   614 ACHANQTIFDMMRQHNIYDINDLTRIKVMSHS-QENTDSIKVFDEDLSTVVLLTKEERDELKTAG 677
            .|..|:.|:..:....|::|:......|.|.. ....:.:||   ||..::||..|.:..|....
Zfish   575 NCKDNRGIYSALHLDRIFNISSFFNTSVYSKDVSRKFEGLKV---DLRGIILLESEGKVNLNNFS 636

  Fly   678 ESKLAKYHSSLYMPSLCTQFTPMNL----NALSEQLYKLS-NDLEYPAYGWAKVSFWNEGLNT-- 735
            |:.:.:...:.|:..:....|.::|    |.|..|..:|| ..|:....|.|         ||  
Zfish   637 ETGINEIDFAAYLEEVNKGVTRIDLIDFANQLDAQADQLSKGTLQTSLKGHA---------NTIR 692

  Fly   736 KAFYRNFVPKLTSL-VEKMKANLKKIDELISYENHDFTNTIKILTATAINSEQFIQTRGKDYINA 799
            :...:..||...|: ..|.::.|.:...|:...:.|....::.:.....:::..|.......||.
Zfish   693 QIHIQQVVPLEQSMKYVKARSTLNQSIRLLERTSSDLPLRVEDVLKAVDDAQNLISYNATFVINQ 757

  Fly   800 LGGNLTNSIDQMIDDYIDMIIKEANESVGHCAPLSYIYYRGVDLI----CHRIVDPINGFWVGIL 860
            .......:|......|||.|.......|..|.|||.|    ||.:    |..::|.:|.||.|:.
Zfish   758 ETEKYKQNIIGYFKQYIDWIRTSLALEVATCKPLSNI----VDTVEILGCGFLLDSMNTFWFGLG 818

  Fly   861 LCALLFLPILFVAHRLMCLYKK-----IYPYLATVGAAGVVEGGSDYLYDAYSERDREHVPLANV 920
            .|.|..||.:.::.:|...|::     :|..:.|.....:..|.:.| |:...|..:.|| :.::
Zfish   819 CCTLFLLPSIILSVKLAKFYRRMDTEDVYDDIETFPMKTMEIGYNGY-YNELLEGIQSHV-MESI 881

  Fly   921 P 921
            |
Zfish   882 P 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
promLNP_001261351.1 Prominin 76..881 CDD:283200 184/864 (21%)
prom1aXP_021336643.1 Prominin 50..839 CDD:310226 184/864 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596454
Domainoid 1 1.000 110 1.000 Domainoid score I6244
eggNOG 1 0.900 - - E1_KOG4331
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4849
OMA 1 1.010 - - QHG46440
OrthoDB 1 1.010 - - D1129032at2759
OrthoFinder 1 1.000 - - FOG0002387
OrthoInspector 1 1.000 - - otm24618
orthoMCL 1 0.900 - - OOG6_105166
Panther 1 1.100 - - O PTHR22730
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3755
SonicParanoid 1 1.000 - - X1580
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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