DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment promL and Prom2

DIOPT Version :9

Sequence 1:NP_001261351.1 Gene:promL / 38372 FlyBaseID:FBgn0026189 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_620089.2 Gene:Prom2 / 192212 MGIID:2138997 Length:835 Species:Mus musculus


Alignment Length:928 Identity:187/928 - (20%)
Similarity:355/928 - (38%) Gaps:188/928 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 GLSVAIFGFALATLIRPTTAQADADPGSWRKGYVGHGTTHEQLGQPHWPPVQYTVYRPTTNYTKA 103
            ||.|.:.|.:|...:....|..| |.||              ||:     |::..:..... |:.
Mouse     6 GLMVPLLGLSLGLALSLPEAVTD-DCGS--------------LGR-----VEHLAFARVPR-TRE 49

  Fly   104 PPPPTSAMNPIFNFTHFLYDKV-----LYRDEPIPEGYIVVKNSDTLSLGPKVEENDWRDLLAHY 163
            ..|...|..|:    :.||..|     :.:..|.|...|     .||...|...:.|  :::.:.
Mouse    50 LAPLVRASGPL----NSLYGTVRRFLSVVQLNPFPAELI-----KTLLNDPSSVKTD--EVVRYE 103

  Fly   164 WMVLIWVVILVVLIIVIPFIAVCYCCFCCCRRCRQGC---PPCTSKQDAQRRFCCGICLLILIIG 225
            ...::..||..:.::::|...:   ||||| ||||.|   .....|..|..|....|.||:..:.
Mouse   104 AGYVVCAVIAGLYLLLVPITGL---CFCCC-RCRQRCGGRVKTEHKAMACERGTLMIFLLLTTLV 164

  Fly   226 LIFGIIIAFVTNKMIDSGFAETSETMKRGSEDTCTYLKDVADHVHHLMMYNYEEMETHVLDQLTH 290
            |:.|::.||.||:...|   :|..::|...| |...|:.:...|.       ||:.. :.:|.:.
Mouse   165 LLIGMVCAFATNQHTHS---QTGPSVKAVPE-TLLSLRGLVSDVP-------EELRA-IAEQFSV 217

  Fly   291 AHRHIFLDLSDTSESNS--------------LAEMERVLENMPEALELMRQVEKMEKDLRFYGSQ 341
            ..:.:..:|....|:..              ||.:..:.:.:..:::.:|.:.....:|:.....
Mouse   218 PQKQVSKELDGVGENLGNVIHNRLKSTVYPVLASVHSLGQALQVSIDHLRALNTTSVELQEAQRH 282

  Fly   342 LRDGVRGIK-RDVNFAVANLCQLQMCQKFLISSNIEHIDSSQCLHFDNLPNTKEFVEGMENIVAS 405
            |...|:..: |.:.....:.|..:.|::.|..:....:.:.    |...|...:.:..::::..:
Mouse   283 LEPPVQAHRERLLALLQDSWCHEENCKRVLSQAGALQLGAD----FSQTPPVDDVLHRLKDVPET 343

  Fly   406 EYYAIPQRGLSRLKKVSDKVKTQLSFVVPPMMRDLTKGRTIFR---------EHATNVRNIVEGV 461
            .:.::.|...:....:...|:.|...||..:.:.|.:.....|         |.|:.....:||:
Mouse   344 NFSSMVQEEKATFNNLPLLVQVQAVSVVKDVKKALAEQPEGLRMLAQAFPGSEAASRWSQALEGL 408

  Fly   462 LSDIHIKTLHSTKSFEDV--YERFGHDRNVVSLIVCLLILLVLFILIFAL---LCGCFGRRRTGY 521
                   ...|....::|  ||.:   |.::..::|..||||:...:..|   :.|.|.|....:
Mouse   409 -------EQRSRPYLQEVQQYETY---RWILGCVLCSAILLVVICNLLGLSLGIWGLFAREDPSH 463

  Fly   522 GDECCSKSTGATCLLLAILLIFCVFSFIALVGLFY-----FMLGMVTYQGACAPLRDQENNTLFR 581
            .:   :|......||:|.:    .|||:..|.|..     |::|.......|   |..|:..|:.
Mouse   464 SE---TKGEAGARLLMAGV----AFSFLFAVPLILLVFVTFLVGGNVQTLVC---RSWESGELYE 518

  Fly   582 ------QLDASIDLNHYLPPSESNKEVVQPLKMSSAIKACHANQTIFDMMRQHNIYDINDLTRIK 640
                  .|..|::|: ||...:.|..:||      |.:.|.|...::.:::.::.||::....||
Mouse   519 FADTPGNLPPSMNLS-YLLGLKKNISIVQ------AYRQCKAGAVLWKVLQLNDSYDLDKHLDIK 576

  Fly   641 VMSHS-QENTDSIKVFDEDLSTVVLLTKEERDELKTAGESKLAKYHSSLYMPSLCTQFTPMNLNA 704
            ..:|. |:...|.:|   ||..:.||:...|.:|:....|.|.|.|   |...|.....|:    
Mouse   577 QYTHKIQQELQSFQV---DLKELDLLSPTARQDLEALQRSGLEKIH---YRGFLVQIQKPV---- 631

  Fly   705 LSEQLYKLSNDLEYPAYGWAKVSFWNEGL----------NTKAFYRNFVPKLTSLVEKMKANLKK 759
            ::..:::|:.:||    |.|:..  |:.|          ..::.|:..|....|||.|:..::|.
Mouse   632 VNTDMWQLAQELE----GLAQAQ--NDSLLRQQLREEARELRSLYQEKVVPQESLVTKLNFSVKT 690

  Fly   760 IDELISYENHDFTNTIKILTATAINSEQFIQTRGKDYINALGGNLTNSIDQMI------------ 812
            ::.|              ..:..:|:..|:     |.:..|.|.|...|:.::            
Mouse   691 LESL--------------APSLQVNTSDFL-----DSVTRLKGELPVQINHILRNATECFLTREM 736

  Fly   813 ---DDYIDMIIKEANESVGHCAPLSYIYYRGVDLICHRIVDPINGFWVGILLCALLFLPILFVAH 874
               ..|:..:..|..:.:..|.|.|.....|..::|..:.||.|.||..:..|....:|.:..|.
Mouse   737 GYFSQYVTWVRAEVTQRIATCQPFSTALDNGHVILCDMMADPWNAFWFCLGWCTFFLIPSIIFAV 801

  Fly   875 RLMCLYKKIYPYLATVGA 892
            :....::.|...|::..:
Mouse   802 KTSKYFRPIRKRLSSTSS 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
promLNP_001261351.1 Prominin 76..881 CDD:283200 175/878 (20%)
Prom2NP_620089.2 Prominin 29..808 CDD:283200 178/891 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850502
Domainoid 1 1.000 129 1.000 Domainoid score I5224
eggNOG 1 0.900 - - E1_KOG4331
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 132 1.000 Inparanoid score I4594
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46440
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002387
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22730
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3755
SonicParanoid 1 1.000 - - X1580
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.890

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