DRSC/TRiP Functional Genomics Resources

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Protein Alignment promL and M28.8

DIOPT Version :9

Sequence 1:NP_001261351.1 Gene:promL / 38372 FlyBaseID:FBgn0026189 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_496294.1 Gene:M28.8 / 174641 WormBaseID:WBGene00010899 Length:831 Species:Caenorhabditis elegans


Alignment Length:921 Identity:167/921 - (18%)
Similarity:298/921 - (32%) Gaps:340/921 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 PTTNYTKAPPPPTSAMNPIFNFTHFLYDKVLYRDEPIPEGYIVVKNSDTLSLGPKVEENDWRDL- 159
            |..|.|   .|...:|.|.|..::..||..    :.|.:|.....||.|.        :|..|| 
 Worm    24 PQCNQT---TPQIKSMKPNFGASNAFYDIA----KGISDGLQNTPNSKTY--------DDLNDLI 73

  Fly   160 ----------------LAHYWMVLIWVVILVVLIIVIPF-IAVCYCCFCCCRRCRQGCPPCTSKQ 207
                            :.....::.|.|..|.::..:.| :|.|..         |.|..|..|:
 Worm    74 FGNGAVSYNQVIQDMVINQIGAIIFWSVGFVFVLAALVFGVATCIW---------QICFSCVPKE 129

  Fly   208 DAQRRFCCGIC---LLILIIG------LIFGIIIAFVTNKMIDSGFAETSETMKRGSEDTCTYLK 263
            .:.|....|..   ||:.:..      :||.:....:|:. ||:|....::|    :.|..|.:.
 Worm   130 TSTRSEITGYVYAGLLVTVFAFTLTGLIIFNVAETDLTDS-IDNGMVYINQT----ASDLNTVIN 189

  Fly   264 DVADHVH--------------HLMMYNY--------------------EEMETHVLDQLTHAHRH 294
            |..|.|.              :|.:.||                    |.....:.:..|....:
 Worm   190 DGTDQVTCEVTTTTTQTFGNVNLFISNYSAIVVGGTATEVGLTAVNAFEYRNFQIQNNATIDAAN 254

  Fly   295 IFL----------DLSDTSES-------------NSLAEMERVLENMPEALELMRQVEKMEKDLR 336
            |.|          |...|.:|             |:|:...:.:...||.:.|..|::.::|:::
 Worm   255 ILLTSMDNINTNGDACTTDKSVLQQQIEIMIPTLNALSSGAQTVHTSPEIIALNDQIDLLKKNIQ 319

  Fly   337 FYGSQLRDGVRGIKRDVNFAVANLCQLQMCQKFLISSNIEHIDSSQCLHFDNLPNTKEFVEGMEN 401
            .........:...:..:|.|:.::..:        ..|:::       ..:|:.|:  ......:
 Worm   320 TQADSASGSINSTQGTINDAMTSIRNM--------LGNVQN-------DLNNVMNS--LASAHRD 367

  Fly   402 IVASEYYAIPQRGLSRLKKVSDKVKTQLSFVVPPMMRDLTKGRTIFREHATNVRNIVEGVLSDIH 466
            :|.|..|:    ||        |:..:|...:|                                
 Worm   368 VVTSSAYS----GL--------KIGIRLLITIP-------------------------------- 388

  Fly   467 IKTLHSTKSFEDVYERFGHDRNVVSLIVCLLILLVLFILIFALLCGCFGRRRTGYGDECCSKSTG 531
                                    :.|.||..:|....::.:||                 |...
 Worm   389 ------------------------ACIGCLFCILAFVAVVLSLL-----------------KKEN 412

  Fly   532 ATCLLLAILLIFCVFSFIALVGLFY----FMLGMVTYQGACAPLRDQENNTLFRQLDASIDLNHY 592
            ...|..|:|:.|.:...|::|.:.:    |:||.:| ..||.|:.:..|.||||.::.:|     
 Worm   413 VEFLATAVLVAFYLTILISIVLILFSSAAFVLGWLT-SAACVPIFEDNNYTLFRLMNQTI----- 471

  Fly   593 LPPSESNKEVVQPLKMSSAIKACH----------ANQTIF---DMMRQHNIYDINDLTRIKVMS- 643
            .|....:.:.|   .:...:::|:          ..|||.   .:.:|.|:....|....::|| 
 Worm   472 APVGTGSPDTV---NIGQLLQSCNNPSMTLYTAVDGQTIISADSINQQINLASYRDAANNEIMSQ 533

  Fly   644 -HSQENTDSIKVFDED-LSTVVLLTKEERDELKTAGESKLAKYHSSLYMPSLCTQFTPMNLNALS 706
             :|....|:..:.|.: |:.:|          ..|.|:.|          |:|            
 Worm   534 PNSTYTIDNSYLTDSNSLNQIV----------NAANEANL----------SVC------------ 566

  Fly   707 EQLYKLSNDLEYPAYGWAKVSFWNEGLNTKAFYRNFVPKLTSLVEKMKANLKKIDELISYENHDF 771
                  .||                  :..|.|::::.||.            :.:.:|   :.|
 Worm   567 ------GND------------------DATAKYKDYIQKLA------------VSDALS---NQF 592

  Fly   772 TNTIKILTATAINSEQFIQTRGKDYINALGGNLTNSIDQMIDDYIDMIIKEANESVGHCAPLSYI 836
            ...::.|.|.|.|:....:.:..:|.|.  |:|  ||:|.|.|    :|.....:|..|.|...:
 Worm   593 ITNLQTLAANAPNTTSIAKNQNNNYFNQ--GDL--SINQSISD----LIINLQTNVFMCRPFVDV 649

  Fly   837 YYRGVDLICHRIVDPINGFWVGILLCALLFLPILFVAHRLMCLYKKIYPYLATVGAAGVVEGGSD 901
            |..|..::|.:...||.|.|..:.|..|    .||....|:.|   :|.:|.|         .||
 Worm   650 YNNGGFVMCEQFGKPIQGLWAAVGLTGL----FLFFQSILLLL---VYRWLRT---------NSD 698

  Fly   902 YLYDAYSERDR 912
            .| ..|:.||:
 Worm   699 DL-AMYNYRDK 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
promLNP_001261351.1 Prominin 76..881 CDD:283200 158/888 (18%)
M28.8NP_496294.1 Prominin <328..679 CDD:283200 94/544 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1129032at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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