DRSC/TRiP Functional Genomics Resources

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Protein Alignment promL and M28.8

DIOPT Version :10

Sequence 1:NP_647770.1 Gene:promL / 38372 FlyBaseID:FBgn0026189 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_496294.1 Gene:M28.8 / 174641 WormBaseID:WBGene00010899 Length:831 Species:Caenorhabditis elegans


Alignment Length:921 Identity:167/921 - (18%)
Similarity:298/921 - (32%) Gaps:340/921 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 PTTNYTKAPPPPTSAMNPIFNFTHFLYDKVLYRDEPIPEGYIVVKNSDTLSLGPKVEENDWRDL- 159
            |..|.|   .|...:|.|.|..::..||..    :.|.:|.....||.|.        :|..|| 
 Worm    24 PQCNQT---TPQIKSMKPNFGASNAFYDIA----KGISDGLQNTPNSKTY--------DDLNDLI 73

  Fly   160 ----------------LAHYWMVLIWVVILVVLIIVIPF-IAVCYCCFCCCRRCRQGCPPCTSKQ 207
                            :.....::.|.|..|.::..:.| :|.|..         |.|..|..|:
 Worm    74 FGNGAVSYNQVIQDMVINQIGAIIFWSVGFVFVLAALVFGVATCIW---------QICFSCVPKE 129

  Fly   208 DAQRRFCCGIC---LLILIIG------LIFGIIIAFVTNKMIDSGFAETSETMKRGSEDTCTYLK 263
            .:.|....|..   ||:.:..      :||.:....:|:. ||:|....::|    :.|..|.:.
 Worm   130 TSTRSEITGYVYAGLLVTVFAFTLTGLIIFNVAETDLTDS-IDNGMVYINQT----ASDLNTVIN 189

  Fly   264 DVADHVH--------------HLMMYNY--------------------EEMETHVLDQLTHAHRH 294
            |..|.|.              :|.:.||                    |.....:.:..|....:
 Worm   190 DGTDQVTCEVTTTTTQTFGNVNLFISNYSAIVVGGTATEVGLTAVNAFEYRNFQIQNNATIDAAN 254

  Fly   295 IFL----------DLSDTSES-------------NSLAEMERVLENMPEALELMRQVEKMEKDLR 336
            |.|          |...|.:|             |:|:...:.:...||.:.|..|::.::|:::
 Worm   255 ILLTSMDNINTNGDACTTDKSVLQQQIEIMIPTLNALSSGAQTVHTSPEIIALNDQIDLLKKNIQ 319

  Fly   337 FYGSQLRDGVRGIKRDVNFAVANLCQLQMCQKFLISSNIEHIDSSQCLHFDNLPNTKEFVEGMEN 401
            .........:...:..:|.|:.::..:        ..|:::       ..:|:.|:  ......:
 Worm   320 TQADSASGSINSTQGTINDAMTSIRNM--------LGNVQN-------DLNNVMNS--LASAHRD 367

  Fly   402 IVASEYYAIPQRGLSRLKKVSDKVKTQLSFVVPPMMRDLTKGRTIFREHATNVRNIVEGVLSDIH 466
            :|.|..|:    ||        |:..:|...:|                                
 Worm   368 VVTSSAYS----GL--------KIGIRLLITIP-------------------------------- 388

  Fly   467 IKTLHSTKSFEDVYERFGHDRNVVSLIVCLLILLVLFILIFALLCGCFGRRRTGYGDECCSKSTG 531
                                    :.|.||..:|....::.:||                 |...
 Worm   389 ------------------------ACIGCLFCILAFVAVVLSLL-----------------KKEN 412

  Fly   532 ATCLLLAILLIFCVFSFIALVGLFY----FMLGMVTYQGACAPLRDQENNTLFRQLDASIDLNHY 592
            ...|..|:|:.|.:...|::|.:.:    |:||.:| ..||.|:.:..|.||||.::.:|     
 Worm   413 VEFLATAVLVAFYLTILISIVLILFSSAAFVLGWLT-SAACVPIFEDNNYTLFRLMNQTI----- 471

  Fly   593 LPPSESNKEVVQPLKMSSAIKACH----------ANQTIF---DMMRQHNIYDINDLTRIKVMS- 643
            .|....:.:.|   .:...:::|:          ..|||.   .:.:|.|:....|....::|| 
 Worm   472 APVGTGSPDTV---NIGQLLQSCNNPSMTLYTAVDGQTIISADSINQQINLASYRDAANNEIMSQ 533

  Fly   644 -HSQENTDSIKVFDED-LSTVVLLTKEERDELKTAGESKLAKYHSSLYMPSLCTQFTPMNLNALS 706
             :|....|:..:.|.: |:.:|          ..|.|:.|          |:|            
 Worm   534 PNSTYTIDNSYLTDSNSLNQIV----------NAANEANL----------SVC------------ 566

  Fly   707 EQLYKLSNDLEYPAYGWAKVSFWNEGLNTKAFYRNFVPKLTSLVEKMKANLKKIDELISYENHDF 771
                  .||                  :..|.|::::.||.            :.:.:|   :.|
 Worm   567 ------GND------------------DATAKYKDYIQKLA------------VSDALS---NQF 592

  Fly   772 TNTIKILTATAINSEQFIQTRGKDYINALGGNLTNSIDQMIDDYIDMIIKEANESVGHCAPLSYI 836
            ...::.|.|.|.|:....:.:..:|.|.  |:|  ||:|.|.|    :|.....:|..|.|...:
 Worm   593 ITNLQTLAANAPNTTSIAKNQNNNYFNQ--GDL--SINQSISD----LIINLQTNVFMCRPFVDV 649

  Fly   837 YYRGVDLICHRIVDPINGFWVGILLCALLFLPILFVAHRLMCLYKKIYPYLATVGAAGVVEGGSD 901
            |..|..::|.:...||.|.|..:.|..|    .||....|:.|   :|.:|.|         .||
 Worm   650 YNNGGFVMCEQFGKPIQGLWAAVGLTGL----FLFFQSILLLL---VYRWLRT---------NSD 698

  Fly   902 YLYDAYSERDR 912
            .| ..|:.||:
 Worm   699 DL-AMYNYRDK 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
promLNP_647770.1 Prominin 76..881 CDD:461660 158/888 (18%)
M28.8NP_496294.1 Prominin <328..679 CDD:461660 94/544 (17%)

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