DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45067 and Prom1

DIOPT Version :9

Sequence 1:NP_001334707.1 Gene:CG45067 / 38371 FlyBaseID:FBgn0266437 Length:881 Species:Drosophila melanogaster
Sequence 2:XP_008768433.1 Gene:Prom1 / 60357 RGDID:69367 Length:866 Species:Rattus norvegicus


Alignment Length:898 Identity:198/898 - (22%)
Similarity:332/898 - (36%) Gaps:261/898 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PQNRYAEPESRSNNGDADSMCPITYLSHVFTGSVVSYAKEVPKGYISKDGNDIGSKVQEDDWEAY 111
            |...| |.:...|.|..|   |:..:.|:|..  |....:.|:        |:..|:.:..::..
  Rat    37 PTTEY-ETQDTFNAGIID---PLYQMVHIFLN--VVQPNDFPQ--------DLVKKLIQKRFDIS 87

  Fly   112 LASQKGLKILVLLLVLLF----LLILILGLLYA----------CCCVAWEK-------NERSSRG 155
            :.:::...|::.|.|.::    |:.:|||||:.          |.|....|       .::.:..
  Rat    88 VDTKEPENIVLALKVAIYEIGVLICVILGLLFIFLMPLVGFFFCMCRCCNKCGGEMHQRQKQNES 152

  Fly   156 C-RYCCGILLAILALLMLLFLILAIMAATQLNI-----------NLKNLKASGCYPSNSSQSSAD 208
            | |.|..|.|.::.|||.|.:....:|..|...           |.::|:|.    ...:....|
  Rat   153 CRRKCLAISLLLICLLMSLGIAFGFVANQQTRTRIQRTQKLAESNYRDLRAL----LTEAPKQID 213

  Fly   209 YIF-------QKASERLRHLYVINYDQKV-KRIKSALNQDPSIKYPNRELEVHAKAIERLIEVLR 265
            ||.       .||...|..:     |..: .|||..|.  |.:.....|::..|.||.:..:.|:
  Rat   214 YILGQYNTTKNKAFSDLDSI-----DSVLGGRIKGQLK--PKVTPVLEEIKAMATAIRQTKDALQ 271

  Fly   266 NMRRIKPVMLRIKNRLLDARRLATQFRDALRGVKRDLMVILIA-DCTHSECQDFYRANEIKMLDM 329
            ||          .:.|...|..:||....|..|:..:...|.: ||..........:...::.::
  Rat   272 NM----------SSSLKSLRDASTQLSTNLTSVRNSIENSLNSNDCASDPASKICDSLRPQLSNL 326

  Fly   330 GCLHYDS-LPEFEPLLESVQEVIDSKFIDYPLQAVGQLRRMSSAIKNRMSDILDSVNKDLNKGAK 393
            |..|..| ||..:..|.:|.:|..:.......:....:..:.:.|:|:..|::..|.|.|:..:.
  Rat   327 GSNHNGSQLPSVDRELNTVNDVDRTDLESLVKRGYMSIDEIPNMIQNQTGDVIKDVKKTLDSVSS 391

  Fly   394 KLQERYEA--SLKVLRQVVEEMKKDMPLVVKTNPRSRSTPAADLRRKLGSSWFGTTLCLIVLLML 456
            |::...::  ..:||.|....:......:.::.||.         .:..|.|:...|.:..||.|
  Rat   392 KVKNMSQSIPVEEVLLQFSHYLNDSNRYIHESLPRV---------EEYDSYWWLGGLIVCFLLTL 447

  Fly   457 VPLLLLFGLLIALFS-PKVA----------------------SWLLCAVLVALFILFSVGVILVL 498
            :......|||..:|. .|.|                      |:|.|.:|          :|||:
  Rat   448 IVTFFYLGLLCGVFGYDKRATPTRRGCVSNTGGIFLMAGVGFSFLFCWIL----------MILVV 502

  Fly   499 FYLVHGALIYQAFCSRKFPQPVDNKSI------------------------NPNKFLPENVTTFR 539
            ...|.||.:.:..|     :|.:||.:                        ||:    .|:|   
  Rat   503 LTFVVGANVEKLLC-----EPYENKKLLQVLDTPYLLNDQWQFYLSGILLKNPD----INMT--- 555

  Fly   540 SMPMVRTSEILQSCVRNESLY------NVLGIKEIYDPYGFRDDVMIDVVKSLEKMGNTSMPGAP 598
                  ..::.:.|.|...:|      ||..|.|.::    .:.:..|:||.|||:         
  Rat   556 ------FEQVYRDCKRGRGVYATFQLENVFNITENFN----IERLSEDIVKELEKL--------- 601

  Fly   599 KEIHPDAEESAKKLLTGNLSTYDIK-------DYTKYICPQLVPEPNPGPLDGLT--RKLESLAN 654
             .::.|:.|...|  ||..|..|..       :|:.|:  |...:| |..:|.||  ..||:.||
  Rat   602 -NVNIDSIELLDK--TGRKSLEDFAQSGIDRINYSMYL--QEAEKP-PTKVDLLTFASFLETEAN 660

  Fly   655 KVEPGVTLKN----QAIHLRA-YQKHLCVPLAAIVQRLIKRLKQMDWLLSGGYGSFVKYLHHLLD 714
            ::..| .||.    .|.::|| :|:|  ||   .||:.:..|||..|                  
  Rat   661 QLPDG-NLKQAFLMDAQNIRAIHQQH--VP---PVQQSLNSLKQSVW------------------ 701

  Fly   715 KIKQGDDLLRQDSKKEADEVAR--------------NISKLV-----KSG------LDDYVRVVE 754
                   .|:|.|.|..:||.:              |:|.:|     |.|      .:.|::.|.
  Rat   702 -------ALKQTSSKLPEEVKKVLASLDSAQHFLTSNLSSIVIGETKKFGRTIIGYFEHYLQWVL 759

  Fly   755 EATKEDMESCEPLIREDDEAMVEYADLCNRIAKPMNAIWFWLLLFSSLLLPTI 807
            .|..|.|.||:|:|...|.|:  ...||:.:|.|:|..||.:...:.||||.:
  Rat   760 YAITEKMTSCKPMITAMDSAV--NGILCSYVADPLNLFWFGIGKATMLLLPAV 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45067NP_001334707.1 None
Prom1XP_008768433.1 Prominin 18..821 CDD:398888 198/898 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354198
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46440
OrthoDB 1 1.010 - - D1129032at2759
OrthoFinder 1 1.000 - - FOG0002387
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22730
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1580
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.960

Return to query results.
Submit another query.