DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45067 and prom1b

DIOPT Version :9

Sequence 1:NP_001334707.1 Gene:CG45067 / 38371 FlyBaseID:FBgn0266437 Length:881 Species:Drosophila melanogaster
Sequence 2:XP_021336908.1 Gene:prom1b / 378834 ZFINID:ZDB-GENE-031003-1 Length:883 Species:Danio rerio


Alignment Length:944 Identity:194/944 - (20%)
Similarity:333/944 - (35%) Gaps:289/944 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LVRFRRL-SPQNRYAEPESRSNNGDADSMCPITYLSHVFTGSVV----SYAKEVPKGYI------ 92
            ||.|..| |.::|....||....  |....|:..|...|..|||    :|.:..|.|.:      
Zfish    11 LVMFWGLTSSEDREEHRESPPRT--AMLRAPVETLDFGFVPSVVYETHAYYEPGPMGILFHMVHA 73

  Fly    93 ----------SKD------GNDIGSKVQEDDWE---------AYLASQKGLKILVLLLVLLFLLI 132
                      .||      ..::|. ::.||::         ..:..:.|..:|.:|.|...||:
Zfish    74 FLYVVQPNPFPKDLIVKMVQQNMGG-IKGDDYKKPENVVLLLQTIYYELGFIVLSVLGVFFVLLM 137

  Fly   133 LILGLLY-AC-CC--VAWEKNERSSRGCRYCCGILLAILALLMLLFLILAIMAATQLN------- 186
            .|:||.: .| ||  ...|.::|..:......|..:|.| :...:||.:.:..|...|       
Zfish   138 PIVGLCFCVCRCCENCGGEMHQRQKKNGDCLRGFYMATL-IATSVFLAVGVTVAYVANQNITSQI 201

  Fly   187 --------INLKNLKASGCY-PSNSSQSSADYIF--QKASERLRHLYVINYDQKVKRIKSALNQD 240
                    .|:::|||...| |:.....:|.|..  .|....|.::..:...|...:::|.:  .
Zfish   202 KSTRRLVSTNIRDLKAFANYTPAQIDYLTAQYTTAKNKVLSDLDNIGTLLGGQIHNKLESEV--V 264

  Fly   241 PSIKYPNRELEVHAKAIERLIEVLRNMRR-IKPVMLRIKNRLLDARRLATQF---RDALRGVKRD 301
            |::   :..|.:.|..:|..|:.:|..:. ::.|...::.......||....   |.:|.....|
Zfish   265 PAL---DHALRMTAVKVESAIKAMRETKESLESVSTSLETLQEGTGRLQVSLQSERVSLSNTLND 326

  Fly   302 LMVILIADCTHSECQDFYRANEIKMLDMGCL-------HYDSLPEFEPLLESVQEVID------- 352
             ......|.||:       .|.|:    |.|       :::.||:.|..|.::..|:.       
Zfish   327 -WACSNEDVTHT-------CNSIR----GTLNQLALSANFNGLPDVEAPLANLDAVLKTDLSNIV 379

  Fly   353 ----SKFIDYPLQAVGQLRRMSSAIKNRMSDILDSVNKDLNKGAKKLQERYEASLKVLRQVVEEM 413
                |.|.|.|.....|.:.:.||:. ::..:||....::....|...  .|.:|:...:.:.:.
Zfish   380 QKGYSSFNDTPQLVREQTKGIVSALP-KVKGLLDKSGAEIIGFTKMFP--VEPALQNFSKFLTDS 441

  Fly   414 KKDM----PLVVKTNPRSRSTPAADLRRKLGSSWFGTTL--CLIVLLMLVPLL-LLFG------- 464
            :|::    |.:          ...|..|     |.|..|  ||:||::....| ||.|       
Zfish   442 QKNIEAYYPQI----------DQLDFYR-----WIGCVLICCLVVLVLAFNFLGLLCGSCGYDKN 491

  Fly   465 ----------------LLIALFSPKVASWLLCAVLVALFILFSVGVILVLFYLVHGALIYQAFCS 513
                            |:.::....:.||:|..|:|..||:              |..|.:..| 
Zfish   492 STPTTRGCLSNTGGNLLMASVGFSFIFSWVLMGVVVTTFIV--------------GGNIEKLVC- 541

  Fly   514 RKFPQPVDNKSI----------NPNK--FLP------ENV-TTFRSMPMVRTSEILQSCVRNESL 559
                :|:.|:.|          :|.|  |||      .|: .|..||        .:.|..|..|
Zfish   542 ----EPLANRQIFKIIDTPYMVHPTKKNFLPGMLFQDPNIDLTIGSM--------YRDCYENNGL 594

  Fly   560 YNVLGIK----------------EIYDPYGFRDDVMIDV--VKSLEKMGNTSMPGAPKEIHPDAE 606
            |:.|.::                ||.|.:   ::|.:|:  :..||:.|..::            
Zfish   595 YSALQLETKFNFNKFLNATVFNPEIGDIF---NNVNVDLQGMLLLEQEGKDNL------------ 644

  Fly   607 ESAKKLLTGNLSTYDIKDYTKYICPQLVPEPNPG----PLDGLTRKLESLANKVEPGV---TLKN 664
                 :...|....|| ||..|:     .|.|.|    .|.....:|::.|:.:..|.   .||.
Zfish   645 -----IDFANTGIGDI-DYQAYL-----TEVNKGVTVVDLLSYANELDAQADNLPRGALENALKG 698

  Fly   665 QAIHLRAYQKHLCVPLAAIVQRLIKRLKQMDWLLSGGYGSFVKYLHHLLDKIKQGDDLLRQDSKK 729
            .|..:|...|...||:...::                   |||...:|...|:|.:...|:...|
Zfish   699 HASSIRQIHKDQVVPMEQAMK-------------------FVKARSNLNQSIRQLEKTSRELPVK 744

  Fly   730 --------EADE--VARNISKLVKSGLDDYVRV-----------VEEATKEDMESCEPLIREDDE 773
                    ||.|  ::.|.|.:||...|.:::.           |:.:...::..|:|:....|.
Zfish   745 VTNVLNAIEAAEYLISNNASHVVKQESDKFIKKIIGYFSQYTEWVKHSLAMEVAQCKPISNIVDS 809

  Fly   774 AMVEYADLCNRIAKPMNAIWFWLLLFSSLLLPTI 807
            |.:.   .|:.|...:|..||.|.....||:|:|
Zfish   810 AEIV---ACSFIVDSVNTFWFGLGGCCVLLIPSI 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45067NP_001334707.1 None
prom1bXP_021336908.1 Prominin 37..851 CDD:310226 185/916 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596459
Domainoid 1 1.000 110 1.000 Domainoid score I6244
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4849
OMA 1 1.010 - - QHG46440
OrthoDB 1 1.010 - - D1129032at2759
OrthoFinder 1 1.000 - - FOG0002387
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22730
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1580
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.010

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