DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45067 and prom1a

DIOPT Version :9

Sequence 1:NP_001334707.1 Gene:CG45067 / 38371 FlyBaseID:FBgn0266437 Length:881 Species:Drosophila melanogaster
Sequence 2:XP_021336643.1 Gene:prom1a / 322857 ZFINID:ZDB-GENE-030131-1577 Length:902 Species:Danio rerio


Alignment Length:794 Identity:167/794 - (21%)
Similarity:304/794 - (38%) Gaps:181/794 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 GLKILVLLLVLLFLLILILGLLYA-C-CC--VAWEKNERSSRGCRYCCGILLAILALLMLLFLIL 177
            |..:...|.:|..:|:.::|||:. | ||  ...|.::|..:......|:|..:  ||...|:|.
Zfish   113 GFVVCAALGLLFTVLLPLVGLLFCLCRCCDNCGGEMHQRQRKNADCLRGLLTTL--LLTTTFIIT 175

  Fly   178 A-IMAATQLNINL------------KNLKASGCYPSNSSQSSADYIFQK---ASERLRH----LY 222
            | ::.|...|.||            .|||....: :|.:.:..||:..:   ..|::.|    :.
Zfish   176 AGVLCAYAANQNLSSQLKGMRRLVKSNLKDLHTF-ANQTPAQIDYLISRYGTVKEQVLHDLENVG 239

  Fly   223 VI----NYDQKVKRIKSALNQDPSIKYPNRELEVHAKAIERLIEVLRN----MRRIKPVMLRIKN 279
            ||    .:::..|.:|.||  |.::.....::|...||:....:.|.|    :..::...::::.
Zfish   240 VILGGRIHEELGKEVKPAL--DATLSMTGIKVEKAIKAMRDTKDALENVSLTLETLQEGTVKLQA 302

  Fly   280 RLLDARRLATQFRDALRGVKRDLMVILIADCTHSECQDFYR--ANEIKMLDMGCLHYDSLPEFEP 342
            .|       :..|::||....|.:      |..:...:..|  .|.|..|::.. :|.|||:...
Zfish   303 NL-------SVVRNSLRNALNDPV------CVDAPAPEICRNIRNSIPKLEIAA-NYSSLPDVTD 353

  Fly   343 LLESVQEVID-----------SKFIDYPLQAVGQLRRMSSAIKNRMSDILDSVNKDLNKGAKKLQ 396
            .|..|.:|:.           :.|.|.|.....|.|.:...:|    .:||.:..::...:|.|.
Zfish   354 QLNKVNDVLKTDLSQIVAKGIASFNDTPAMVTAQTRNIVEGVK----VLLDDIGNNITSFSKMLP 414

  Fly   397 ERYEASL----KVLRQVVEEMKKDMPLVVKTNPRSRSTPAADLRRKLGSSWFG--TTLCLIVLLM 455
              ..:||    :::.....:::...|.:          ...|..|     |.|  |..|:|||::
Zfish   415 --VHSSLANFTRMISHTHSQIEDIYPQI----------DQMDFYR-----WIGCITLCCMIVLIL 462

  Fly   456 LVPLLLLFGLLIALF------SPKV--------ASWLLCAVLVALFILFS---VGVILVLFYLVH 503
            ....|   |||..:.      ||..        .::|:..  |....|||   :|||..|| |..
Zfish   463 TFNFL---GLLCGILGFDRHASPTTRGCVSNTGGNFLMAG--VGFSFLFSWVLMGVITALF-LAG 521

  Fly   504 G---ALIYQAFCSRKFPQPVDNK-SINP--NKFLPENVTTFRSMPMVRTSEILQSCVRNESLYNV 562
            |   .|:.:.|.:|:..:.:|.. .:|.  ..|:|..:.....|.:...| :..:|..|..:|:.
Zfish   522 GNLEKLVCEPFQTRQLFKVLDTPYLVNSAWRNFIPGYLYNDPEMDLTAYS-LYSNCKDNRGIYSA 585

  Fly   563 LGIKEIYDPYGFRDDVMIDVVKSLEKMGNTSMPGAPKEIHPDAE------------ESAKKLLTG 615
            |.:..|:               ::....|||:  ..|::....|            ||..|:...
Zfish   586 LHLDRIF---------------NISSFFNTSV--YSKDVSRKFEGLKVDLRGIILLESEGKVNLN 633

  Fly   616 NLSTYDIK--DYTKYICPQLVPEPNPG----PLDGLTRKLESLANKVEPG---VTLKNQAIHLRA 671
            |.|...|.  |:..|:     .|.|.|    .|.....:|::.|:::..|   .:||..|..:|.
Zfish   634 NFSETGINEIDFAAYL-----EEVNKGVTRIDLIDFANQLDAQADQLSKGTLQTSLKGHANTIRQ 693

  Fly   672 YQKHLCVPLAAIVQRLIKR--LKQMDWLLSGGYGSFVKYLHHLLDKIKQGDDLLRQDS----KKE 730
            ......|||...::.:..|  |.|...||..........:..:|..:....:|:..::    .:|
Zfish   694 IHIQQVVPLEQSMKYVKARSTLNQSIRLLERTSSDLPLRVEDVLKAVDDAQNLISYNATFVINQE 758

  Fly   731 ADEVARNISKLVKSGLDDYVRVVEEATKEDMESCEPLIREDDEAMVEYADL--CNRIAKPMNAIW 793
            .::..:||....|    .|:..:..:...::.:|:||     ..:|:..::  |..:...||..|
Zfish   759 TEKYKQNIIGYFK----QYIDWIRTSLALEVATCKPL-----SNIVDTVEILGCGFLLDSMNTFW 814

  Fly   794 FWLLLFSSLLLPTI 807
            |.|...:..|||:|
Zfish   815 FGLGCCTLFLLPSI 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45067NP_001334707.1 None
prom1aXP_021336643.1 Prominin 50..839 CDD:310226 167/794 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596457
Domainoid 1 1.000 110 1.000 Domainoid score I6244
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 111 1.000 Inparanoid score I4849
OMA 1 1.010 - - QHG46440
OrthoDB 1 1.010 - - D1129032at2759
OrthoFinder 1 1.000 - - FOG0002387
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22730
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1580
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.010

Return to query results.
Submit another query.