DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45067 and prmn-1

DIOPT Version :9

Sequence 1:NP_001334707.1 Gene:CG45067 / 38371 FlyBaseID:FBgn0266437 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_509907.1 Gene:prmn-1 / 181330 WormBaseID:WBGene00008571 Length:866 Species:Caenorhabditis elegans


Alignment Length:900 Identity:195/900 - (21%)
Similarity:347/900 - (38%) Gaps:190/900 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ITYLSHVF-----------TGSVVSYAKEVPKGYISKDGNDIGSKVQEDDWEAYLASQKGLKILV 122
            ||::|:.|           ||.:|.....|.|.|                |: ::..|||..:|.
 Worm    60 ITFVSYPFPHQELLNDQALTGDLVELQSSVEKKY----------------WQ-WIEFQKGWIVLS 107

  Fly   123 LLLVLLFLLILILGLLYACC-CVAWEKNERSSRGCRY--C----CGILLAILALLMLLFLILAIM 180
            :.||.:.:|.::....|.|| |:....:::.:...||  |    |.:||.:|...........:|
 Worm   108 VGLVAISVLFVVFYFFYKCCVCICSRSSKKQNTDARYDGCKRSMCNLLLFVLVSANAFVAFTLLM 172

  Fly   181 AATQLNINLKNLKASGCYPSNSSQSSAD-YIFQKASE-RLRHLYVINYDQKVKRIKSALNQDPSI 243
            .:....|.|..|      |:..:|...| ..:::.|: |:|.|.:.:|    :.:.|.:.:..|.
 Worm   173 TSQYAQIGLDKL------PNRMNQCVDDLQSYKRDSDMRIRKLLIDDY----QVLNSTITKQLST 227

  Fly   244 KYPNRELEVHAKAIERLIEVLRNMRRIKPVM----------LRIKNRLLDARRLATQFRDALRGV 298
            ...|....|.......:|:|..|:.::...|          :|..|.  :..|...:| ..||..
 Worm   228 AGYNVVDRVKKLTGAHVIDVFMNISKVAQEMHDGLESVHGKVRFLNE--EGSRFEAEF-SRLRNT 289

  Fly   299 KRDLMVILIADCTHSECQDFYRANEIKMLDMGCLHYDSLPEFEPLLESV---QEVIDSKFIDYPL 360
            ..:.:|         :|.:    ||::.:...|      .:.|.||||:   |..||.||:....
 Worm   290 ANEELV---------KCLE----NELEPVRSMC------AKAERLLESLAVTQFKIDQKFLPDAT 335

  Fly   361 QAVGQLRRMSSAIKNRMSDILDSVNKDLNKGAKKLQERYEASLKVLRQVVEEMKKDMPLVVKT-- 423
            :.     .:|..:...::.:|.:.|....:...::|...:......:.:::::..|:.||.:|  
 Worm   336 ET-----GLSEIVNANITQVLAASNNQFEQLESRIQHEIDKETYSAQNMLKQIGDDLFLVAETIS 395

  Fly   424 -------------------NPRSRSTPAADLRRKLGSSWFGTTLCLIVLLMLVPLLLLFGLLIAL 469
                               :|  :.||..   :.:..||: .:|.:..|.:|:.|:.|||:|..:
 Worm   396 TQLRKVTFEALYSTVSYVSDP--KKTPTL---KYMQYSWY-ASLVITSLFILLALIFLFGVLYGI 454

  Fly   470 FSPKVASWL-LCAV--LVALFILFSVGVILVLF-YLVHG--ALIYQA--FCSRKFPQPVDNKSIN 526
            ...:...:. .|.|  ....|..|.:|..|::| :|..|  ||::..  | |....||:.|...:
 Worm   455 CGRRPTYYNDDCCVRSTGGKFYSFGIGAFLLIFVFLAVGTSALMFAVGNF-SNLVCQPMRNPLSH 518

  Fly   527 PNKF--------------LPEN---VTTFRSMPMVRTSEILQSCVRNESLYNVLGIKEIYDPYGF 574
            |...              .|||   ||.....|    :||:::|.|||:|||..|..:.|. ...
 Worm   519 PESLSLADRYINLWKANHTPENDIEVTLQSKSP----AEIIRACSRNETLYNFYGFDKKYH-LNK 578

  Fly   575 RDDVMIDVVKSLEKMGNTSMPGAPKEIHPDAEESAKKLLTGNLSTYDIKDYTKYICPQLVPEPNP 639
            ..|...|....|:....|:|...| ||.|         |...:|..:::|..|.....:......
 Worm   579 LQDFEKDAYNQLQISLRTTMENMP-EIRP---------LDAFISRSELRDLEKLASVNVSKVSQQ 633

  Fly   640 G------PLDGL-----TRKL-ESL-ANKVEP-GVTLKNQAIHLRAYQKHLCVPLAAIVQRLIKR 690
            |      .:|.|     ||:. ||| ||...| .|||..:.|  |..:.....||.:.::.|...
 Worm   634 GLNAIKHAMDELDLASKTREFEESLDANSGRPKAVTLVLEQI--RELEIQFAKPLRSRLEALYSN 696

  Fly   691 LKQMDWLLSGGYGSFVKYLHHLLDKIKQGDDLLRQDSKKEADEVARNISKLVKSGLDDYVRVVEE 755
            :..:|..||    .....:..||.|::....||.::.::.....|:...:.:.:.:|.|:..|:.
 Worm   697 ITSLDEKLS----QLQVPVSSLLVKLQHAQALLAENMREHFGRAAKEEFQQMVNNIDQYIVHVKS 757

  Fly   756 ATKEDMESCEPLIREDDEAMVEYADLCNRIAKPMNAIWFWLLLFSSLLLPTICCTHF---LRSRL 817
            ..:.::.||:||.:   .|....|.:|.....|.|..|..:|:...||:|.:..::.   |.|::
 Worm   758 QMESEVTSCQPLTQ---IARQTTAAVCAYTIDPYNGTWMCMLICLVLLIPIVIISNSLIGLYSKM 819

  Fly   818 NSLKHSVATPVSYGESNFMAPGILPLGLPQCQCYRYLPVSAETNVDYLEGMEDYY 872
            ::....:..|.|  |::.|:..|       ...|...|.....|..|.:..:..|
 Worm   820 HAFPKYIVEPPS--ETHHMSSFI-------TDTYDTRPKPGYANYTYTDDYQRNY 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45067NP_001334707.1 None
prmn-1NP_509907.1 Prominin 13..816 CDD:283200 183/840 (22%)
RILP-like <686..763 CDD:304877 14/80 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167634
Domainoid 1 1.000 132 1.000 Domainoid score I3181
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46440
OrthoDB 1 1.010 - - D1129032at2759
OrthoFinder 1 1.000 - - FOG0002387
OrthoInspector 1 1.000 - - otm14335
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22730
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1580
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.960

Return to query results.
Submit another query.