DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht7 and chia

DIOPT Version :9

Sequence 1:NP_647768.3 Gene:Cht7 / 38370 FlyBaseID:FBgn0035398 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_001186489.1 Gene:chia / 548404 XenbaseID:XB-GENE-5868468 Length:482 Species:Xenopus tropicalis


Alignment Length:473 Identity:194/473 - (41%)
Similarity:273/473 - (57%) Gaps:45/473 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   559 QVFCYLTSWSAKRPGAGKFQPENIDPKLCTHIVYAFATLQDYKLTEATDDDPENYESVIALRDNN 623
            ::.||.|:|:..|||.|||:|:||||.||||::||||.:.:.::|....:|...|.|...|::.|
 Frog    23 ELTCYFTNWAQYRPGLGKFKPDNIDPCLCTHLIYAFAGMSNNQITTIEWNDVTLYSSFQNLKNQN 87

  Fly   624 PDLQILLAIGGWAFGSTPFKELTSNVFRMNQFVYEAIDFLRDYKFNGLDVDWEYP--RGA--EDR 684
            .:|:.|||||||.||:.||..:.:.......|:...|.|||.|.|:|||.|||||  ||:  :|:
 Frog    88 GNLKTLLAIGGWNFGTAPFTAMVATAQSRQTFISSVIKFLRQYGFDGLDFDWEYPGSRGSPPQDK 152

  Fly   685 VAYVSLLKELRVAFEGEAKSSGLPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQ 749
            ..:.:|::|:..|||.||..|..|||::||||.|....|.:||.:|::|:.||:|:|||||.||.
 Frog   153 QLFTTLVQEMLAAFEAEASQSNKPRLMVTAAVAAGISNIESGYQIPQLSQALDYIHVMTYDLHGS 217

  Fly   750 WERTVGHNSPLFALESATGYQKKLTVDYSAREWVKQGAPKEKLLIGMPTYGRSFELVNDTQFDIG 814
            ||...|.||||:...|||||...|.|||....|:..|||..||::|.||||.:|.|.|.:...||
 Frog   218 WEGYTGENSPLYTNPSATGYNAYLNVDYVMNYWLNNGAPASKLIVGFPTYGHTFILSNPSNNGIG 282

  Fly   815 SPSSGGGKAGKFTNEAGFLSYYEVCSFLAADNTTLVWDSEQQVPFAYRGNQWVGFDDERSLKTKT 879
            :|:||.|.||.:|.:|||.:|||:|:|| .:..|.:|.|.:.||:||:|::|:|:|:|:|.:.|.
 Frog   283 APTSGNGPAGPYTRQAGFWAYYEICTFL-KNGATNLWSSAEDVPYAYQGSEWLGYDNEKSFQIKA 346

  Fly   880 EWLKEQGFGGIMVWSIDMDDFSGR-CGSGKYPLLTALNDELKDYKVELEYDG---PYESHGPRGA 940
            |||.:...||.|||:||:|||:|. |..||:||:..|.:.|     .::..|   |.....|   
 Frog   347 EWLMKNNLGGAMVWAIDLDDFTGTFCNQGKFPLINTLKNTL-----GVQASGCTPPATPVAP--- 403

  Fly   941 YTTKDPHDVT-----------------------CAEEDGHISYHKDWADCTH-YYMCEGERKHHM 981
             .|..|..|.                       ||   |..|.....|..|: ::.|.....:..
 Frog   404 -VTAAPATVPSGSGSGSSGSGSSSGGSSGGSGFCA---GKASGLYPVAGNTNAFWHCLNGITYQQ 464

  Fly   982 PCPANLVFNPQENVCDWP 999
            .|...|||:|....|:||
 Frog   465 HCQTGLVFDPSCECCNWP 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht7NP_647768.3 Glyco_18 124..468 CDD:214753
GH18_chitolectin_chitotriosidase 125..491 CDD:119351
Glyco_18 559..898 CDD:214753 162/342 (47%)
GH18_chitolectin_chitotriosidase 560..919 CDD:119351 172/363 (47%)
CBM_14 951..1005 CDD:279884 15/50 (30%)
chiaNP_001186489.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 172/363 (47%)
Glyco_18 26..365 CDD:214753 162/339 (48%)
CBM_14 436..482 CDD:279884 13/48 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2066
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

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