DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht7 and chia.2

DIOPT Version :9

Sequence 1:NP_647768.3 Gene:Cht7 / 38370 FlyBaseID:FBgn0035398 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_998414.1 Gene:chia.2 / 406338 ZFINID:ZDB-GENE-040426-2014 Length:470 Species:Danio rerio


Alignment Length:458 Identity:196/458 - (42%)
Similarity:270/458 - (58%) Gaps:30/458 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   562 CYLTSWSAKRPGAGKFQPENIDPKLCTHIVYAFATLQD-YKLTEATDDDPENYESVIALRDNNPD 625
            ||.|:||..|||.||:.|.|:||.||||:.||||.:.. .:|.....:|...|::...|::.||.
Zfish    25 CYFTNWSQYRPGIGKYTPANVDPFLCTHLFYAFAMINHANELITYEWNDETLYKAFNELKNTNPH 89

  Fly   626 LQILLAIGGWAFGSTPFKELTSNVFRMNQFVYEAIDFLRDYKFNGLDVDWEYP--RGA--EDRVA 686
            |:.|||:|||.||||.|..:.|:......|:..:|.|||.|.|:|:|:|||||  ||:  ||:..
Zfish    90 LRTLLAVGGWNFGSTQFSIMVSSAANRQTFIQSSIKFLRTYGFDGMDLDWEYPGSRGSPPEDKQR 154

  Fly   687 YVSLLKELRVAFEGEAKSSGLPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWE 751
            :..|.|||..|:|.|.|::|..||:|:|||.|....|..||::.||:|||||||:|||||||.||
Zfish   155 FTLLCKELLEAYEAEGKATGRRRLMLSAAVSAGKGTIDDGYEIAEIAKYLDFINIMTYDFHGTWE 219

  Fly   752 RTVGHNSPLFALESATGYQKKLTVDYSAREWVKQGAPKEKLLIGMPTYGRSFELV-NDTQFDIGS 815
            |..||||||:......|.......||:.|.|...|.|.|||.:|..||||:|.|. :||  .:|:
Zfish   220 RFTGHNSPLYQGSKDEGDLVYFNTDYAMRYWRDNGTPVEKLRMGFATYGRTFRLTSSDT--SVGA 282

  Fly   816 PSSGGGKAGKFTNEAGFLSYYEVCSFLAADNTTLVWDSEQQVPFAYRGNQWVGFDDERSLKTKTE 880
            |:||...||.:|.||||.||||:|.||  :.||:.|..:|:||:|.:.::|||||.:.|.:||..
Zfish   283 PASGPASAGTYTREAGFWSYYEICGFL--EGTTVQWIDDQKVPYATKNSEWVGFDTKESYETKVR 345

  Fly   881 WLKEQGFGGIMVWSIDMDDFSGR-CGSGKYPLLTALNDELKDYKVELEYDGPYESHGPRGAYTTK 944
            :||::.|||..||::|:|||:|: ||.|.:||:..|.:.|   .:||....|..:..| |..||:
Zfish   346 YLKDKKFGGAFVWALDLDDFAGQFCGQGNHPLMGHLRNLL---DIELPPLPPPTTAKP-GQSTTR 406

  Fly   945 DPHDVT----------C-AEEDGHISYHKDWADCTHYYMCEGERKHHMPCPANLVFNPQENVCDW 998
            .....|          | .:.||..::    .|...||.|.|.:.:...|.|...|:.....|.|
Zfish   407 PTTTTTTTTHAPGPGFCNGKPDGLYAH----PDPNKYYSCAGGQTYVDNCGAGTEFDESCKCCGW 467

  Fly   999 PEN 1001
            |::
Zfish   468 PKH 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht7NP_647768.3 Glyco_18 124..468 CDD:214753
GH18_chitolectin_chitotriosidase 125..491 CDD:119351
Glyco_18 559..898 CDD:214753 163/341 (48%)
GH18_chitolectin_chitotriosidase 560..919 CDD:119351 173/363 (48%)
CBM_14 951..1005 CDD:279884 14/52 (27%)
chia.2NP_998414.1 GH18_chitolectin_chitotriosidase 23..385 CDD:119351 173/363 (48%)
Glyco_18 24..363 CDD:214753 163/341 (48%)
CBM_14 423..468 CDD:279884 12/48 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592086
Domainoid 1 1.000 352 1.000 Domainoid score I965
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 1 1.000 - - mtm6443
orthoMCL 1 0.900 - - OOG6_100224
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.750

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