DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht7 and chia.4

DIOPT Version :9

Sequence 1:NP_647768.3 Gene:Cht7 / 38370 FlyBaseID:FBgn0035398 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_956740.1 Gene:chia.4 / 337333 ZFINID:ZDB-GENE-030131-9279 Length:475 Species:Danio rerio


Alignment Length:470 Identity:198/470 - (42%)
Similarity:271/470 - (57%) Gaps:41/470 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 AQVFCYLTSWSAKRPGAGKFQPENIDPKLCTHIVYAFATLQ-DYKLTEATDDDPENYESVIALRD 621
            :|:.||..:||..||..||:.|.|:||.||||::|||:.:. ..||..:..:|...|:|..||:.
Zfish    21 SQLACYFANWSQYRPDVGKYMPSNVDPHLCTHLIYAFSVINIKNKLATSEWNDETLYQSFNALKQ 85

  Fly   622 NNPDLQILLAIGGWAFGSTPFKELTSNVFRMNQFVYEAIDFLRDYKFNGLDVDWEYPRGA----E 682
            :||:|:.|||:|....|||.|..:.|...:...|:..:|.|||.:.|:|||:|||||...    |
Zfish    86 SNPNLKTLLAVGTLNLGSTQFSRMVSTPQKRQTFIESSIKFLRTHGFDGLDLDWEYPGSGESPPE 150

  Fly   683 DRVAYVSLLKELRVAFEGEAKSSGLPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFH 747
            |:..:..|.|||..|::.|:|::..|||:|||||.|....|.|||::.|:||||||||:||||||
Zfish   151 DKHRFTLLCKELLKAYQAESKATRRPRLMLTAAVAARKGIIDAGYEIAEVSKYLDFINIMTYDFH 215

  Fly   748 GQWERTVGHNSPLFALESATGYQKKLTVDYSAREWVKQGAPKEKLLIGMPTYGRSFEL---VNDT 809
            |.||...||||||:.....||.|.....|::...|..||||.|||.:|...|||:|.|   ||  
Zfish   216 GSWENVTGHNSPLYRDSRDTGDQIYYNTDFAMTYWRDQGAPVEKLRMGFAAYGRTFCLSSAVN-- 278

  Fly   810 QFDIGSPSSGGGKAGKFTNEAGFLSYYEVCSFLAADNTTLVWDSEQQVPFAYRGNQWVGFDDERS 874
              .:|:|.||...||.:|.|||:.||||:|:||...:...:  ::|:||:|..|..||||||::|
Zfish   279 --GLGAPVSGPASAGTYTREAGYWSYYEICTFLQRASVEQI--ADQKVPYATEGLNWVGFDDQKS 339

  Fly   875 LKTKTEWLKEQGFGGIMVWSIDMDDFSGR-CGSGKYPLLTALNDELKDYKVELEYDGPYESHGPR 938
            .:||.::|||:||||..|||:|:|||||: ||.|||||:..|:..|.....|..       |.|:
Zfish   340 YETKVDYLKEKGFGGAFVWSLDLDDFSGQFCGQGKYPLIGHLHTLLNISNTEFR-------HLPK 397

  Fly   939 ----------GAYTTKDP--HDVT-----CAEEDGHISYHKDWADCTHYYMCEGERKHHMPCPAN 986
                      |...|..|  ..||     ||  .|.:....:..:...:..|...|.....|||.
Zfish   398 TIKSGGASATGNIVTTTPIVKTVTSGSDFCA--GGLVGIFANPDNPMTFIQCANGRTFIQNCPAK 460

  Fly   987 LVFNPQENVCDWPEN 1001
            .||:|..:.|:||:|
Zfish   461 TVFDPDCSCCNWPKN 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht7NP_647768.3 Glyco_18 124..468 CDD:214753
GH18_chitolectin_chitotriosidase 125..491 CDD:119351
Glyco_18 559..898 CDD:214753 161/346 (47%)
GH18_chitolectin_chitotriosidase 560..919 CDD:119351 173/367 (47%)
CBM_14 951..1005 CDD:279884 15/51 (29%)
chia.4NP_956740.1 Glyco_18 22..363 CDD:214753 161/346 (47%)
GH18_chitolectin_chitotriosidase 25..381 CDD:119351 172/361 (48%)
ChtBD2 425..473 CDD:214696 12/49 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592085
Domainoid 1 1.000 352 1.000 Domainoid score I965
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 1 1.000 - - mtm6443
orthoMCL 1 0.900 - - OOG6_100224
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X91
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.710

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