DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht7 and chia.4

DIOPT Version :10

Sequence 1:NP_647768.3 Gene:Cht7 / 38370 FlyBaseID:FBgn0035398 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_956740.1 Gene:chia.4 / 337333 ZFINID:ZDB-GENE-030131-9279 Length:475 Species:Danio rerio


Alignment Length:470 Identity:198/470 - (42%)
Similarity:271/470 - (57%) Gaps:41/470 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 AQVFCYLTSWSAKRPGAGKFQPENIDPKLCTHIVYAFATLQ-DYKLTEATDDDPENYESVIALRD 621
            :|:.||..:||..||..||:.|.|:||.||||::|||:.:. ..||..:..:|...|:|..||:.
Zfish    21 SQLACYFANWSQYRPDVGKYMPSNVDPHLCTHLIYAFSVINIKNKLATSEWNDETLYQSFNALKQ 85

  Fly   622 NNPDLQILLAIGGWAFGSTPFKELTSNVFRMNQFVYEAIDFLRDYKFNGLDVDWEYPRGA----E 682
            :||:|:.|||:|....|||.|..:.|...:...|:..:|.|||.:.|:|||:|||||...    |
Zfish    86 SNPNLKTLLAVGTLNLGSTQFSRMVSTPQKRQTFIESSIKFLRTHGFDGLDLDWEYPGSGESPPE 150

  Fly   683 DRVAYVSLLKELRVAFEGEAKSSGLPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFH 747
            |:..:..|.|||..|::.|:|::..|||:|||||.|....|.|||::.|:||||||||:||||||
Zfish   151 DKHRFTLLCKELLKAYQAESKATRRPRLMLTAAVAARKGIIDAGYEIAEVSKYLDFINIMTYDFH 215

  Fly   748 GQWERTVGHNSPLFALESATGYQKKLTVDYSAREWVKQGAPKEKLLIGMPTYGRSFEL---VNDT 809
            |.||...||||||:.....||.|.....|::...|..||||.|||.:|...|||:|.|   ||  
Zfish   216 GSWENVTGHNSPLYRDSRDTGDQIYYNTDFAMTYWRDQGAPVEKLRMGFAAYGRTFCLSSAVN-- 278

  Fly   810 QFDIGSPSSGGGKAGKFTNEAGFLSYYEVCSFLAADNTTLVWDSEQQVPFAYRGNQWVGFDDERS 874
              .:|:|.||...||.:|.|||:.||||:|:||...:...:  ::|:||:|..|..||||||::|
Zfish   279 --GLGAPVSGPASAGTYTREAGYWSYYEICTFLQRASVEQI--ADQKVPYATEGLNWVGFDDQKS 339

  Fly   875 LKTKTEWLKEQGFGGIMVWSIDMDDFSGR-CGSGKYPLLTALNDELKDYKVELEYDGPYESHGPR 938
            .:||.::|||:||||..|||:|:|||||: ||.|||||:..|:..|.....|..       |.|:
Zfish   340 YETKVDYLKEKGFGGAFVWSLDLDDFSGQFCGQGKYPLIGHLHTLLNISNTEFR-------HLPK 397

  Fly   939 ----------GAYTTKDP--HDVT-----CAEEDGHISYHKDWADCTHYYMCEGERKHHMPCPAN 986
                      |...|..|  ..||     ||  .|.:....:..:...:..|...|.....|||.
Zfish   398 TIKSGGASATGNIVTTTPIVKTVTSGSDFCA--GGLVGIFANPDNPMTFIQCANGRTFIQNCPAK 460

  Fly   987 LVFNPQENVCDWPEN 1001
            .||:|..:.|:||:|
Zfish   461 TVFDPDCSCCNWPKN 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht7NP_647768.3 GH18_chitolectin_chitotriosidase 125..491 CDD:119351
GH18_chitolectin_chitotriosidase 560..919 CDD:119351 173/367 (47%)
CBM_14 951..1005 CDD:426342 15/51 (29%)
chia.4NP_956740.1 GH18_chitolectin_chitotriosidase 25..381 CDD:119351 172/361 (48%)
ChtBD2 425..473 CDD:214696 12/49 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.