DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht7 and CHI3L1

DIOPT Version :9

Sequence 1:NP_647768.3 Gene:Cht7 / 38370 FlyBaseID:FBgn0035398 Length:1013 Species:Drosophila melanogaster
Sequence 2:NP_001267.2 Gene:CHI3L1 / 1116 HGNCID:1932 Length:383 Species:Homo sapiens


Alignment Length:368 Identity:167/368 - (45%)
Similarity:241/368 - (65%) Gaps:10/368 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 KIVCYYTNWSQYRVKIGKFVPEDIPADLCTHIIFAFGWLKKNKLSSYESNDETKDNVPGLYERMM 188
            |:|||||:|||||...|...|:.:...||||||::|..:..:.:.::|.||.|      ||..:.
Human    23 KLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDTWEWNDVT------LYGMLN 81

  Fly   189 TLKKANPKLKILLALGGWSFGTQKFKDMSSTRYTRQTFVYSAIPFLRKRGFDGLDMDWEYPKGSD 253
            |||..||.||.||::|||:||:|:|..::|...:|:||:.|..||||..||||||:.|.|| |..
Human    82 TLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYP-GRR 145

  Fly   254 DKKNFVLLLKELREAFEAEAQELKKPRLLLSAAVPVGPDNIRGGYDVPAIASYLDFINLMAYDFH 318
            ||::|..|:||::..|..|||..|| :||||||:..|...|...||:..|:.:||||::|.||||
Human   146 DKQHFTTLIKEMKAEFIKEAQPGKK-QLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTYDFH 209

  Fly   319 GKWERETGHNAPLYAPSTDSEWRKQLSVDNAASLWVKMGAPKEKLVIGMPTYGRSFTLANPDKHG 383
            |.|...|||::||:....|:...:..:.|.|....:::|||..|||:|:||:|||||||:.:. |
Human   210 GAWRGTTGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSFTLASSET-G 273

  Fly   384 PNAPASGGGREGVYTKEGGFLAYYEICEMLLNGAVYVWDDEMKVPYLVDGDQWVGFDDERAIRNK 448
            ..||.||.|..|.:|||.|.|||||||:.|....|:....: :|||...|:||||:||:.::::|
Human   274 VGAPISGPGIPGRFTKEAGTLAYYEICDFLRGATVHRILGQ-QVPYATKGNQWVGYDDQESVKSK 337

  Fly   449 MHWIKSNGFGGAMVWTIDMDDFKGEVCGGNVKYPLIGAMREEL 491
            :.::|.....|||||.:|:|||:|..||.::::||..|:::.|
Human   338 VQYLKDRQLAGAMVWALDLDDFQGSFCGQDLRFPLTNAIKDAL 380

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cht7NP_647768.3 Glyco_18 124..468 CDD:214753 157/343 (46%)
GH18_chitolectin_chitotriosidase 125..491 CDD:119351 165/365 (45%)
Glyco_18 559..898 CDD:214753
GH18_chitolectin_chitotriosidase 560..919 CDD:119351
CBM_14 951..1005 CDD:279884
CHI3L1NP_001267.2 Glyco_18 23..357 CDD:214753 157/343 (46%)
GH18_chitolectin_chitotriosidase 24..380 CDD:119351 165/365 (45%)